HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:73.9 nTPM
HPA:73.9 nTPM
GTEx:18.8 nTPM
FANTOM5:110.4 Scaled Tags Per Million
Pig:76.9 nTPM
Mouse:40.2 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 73.9
Sample id Sample description nTPM
Hippocampus
nTPM: 70.3
2148 Female, age 91, left hemisphere 92.8
2621 Female, age 67, right hemisphere 82.7
1898 Male, age 80, left hemisphere 74.9
1855 Male, age 76, left hemisphere 67.4
1911 Female, age 85, right hemisphere 55.5
2529 Female, age 94, left hemisphere 48.5
Dentate gyrus
nTPM: 70.7
1927 Female, age 91, both hemispheres 86.3
2530 Female, age 94, left hemisphere 74.1
2531 Female, age 67, both hemispheres 73.0
2010 Male, age 76, both hemispheres 72.7
2528 Male, age 74, both hemispheres 59.9
2246 Female, age 85, both hemispheres 58.0
Entorhinal gyrus
nTPM: 58.6
2764 Male, age 80, right hemisphere 65.2
2613 Female, age 94, left hemisphere 59.9
1938 Female, age 85, left hemisphere 59.8
2686 Male, age 75, right hemisphere 58.1
1787 Male, age 76, left hemisphere 56.4
2117 Female, age 91, right hemisphere 52.0
Hippocampus, CA1
nTPM: 73.9
2749 Male, age 80, left hemisphere 122.1
1873 Female, age 85, both hemispheres 72.6
2527 Male, age 74, both hemispheres 63.8
2045 Male, age 76, both hemispheres 61.8
2082 Female, age 91, right hemisphere 49.2
Hippocampus, CA2
nTPM: 63.6
1963 Male, age 80, left hemisphere 95.9
1892 Male, age 76, both hemispheres 76.5
2437 Female, age 94, left hemisphere 55.7
2249 Male, age 74, both hemispheres 55.4
2113 Female, age 91, right hemisphere 51.3
1940 Female, age 85, left hemisphere 47.1
Hippocampus, CA3
nTPM: 67.4
2861 Female, age 67, both hemispheres 93.3
2137 Male, age 80, left hemisphere 86.6
2620 Female, age 94, left hemisphere 61.8
1867 Male, age 76, both hemispheres 58.0
2436 Male, age 74, both hemispheres 53.2
1891 Female, age 85, both hemispheres 51.7
Parahippocampal cortex
nTPM: 57.6
2245 Female, age 91, both hemispheres 71.8
2622 Female, age 67, right hemisphere 62.1
2532 Female, age 72, left hemisphere 62.0
1850 Male, age 80, both hemispheres 58.4
1990 Female, age 91, right hemisphere 55.8
1933 Female, age 85, both hemispheres 55.6
2693 Female, age 94, both hemispheres 55.2
2250 Female, age 67, right hemisphere 54.7
2692 Male, age 74, both hemispheres 52.8
2018 Male, age 76, both hemispheres 47.7
Perirhinal gyrus
nTPM: 57.7
1847 Female, age 91, left hemisphere 61.5
1794 Male, age 80, right hemisphere 60.9
2521 Female, age 94, right hemisphere 59.0
2848 Male, age 76, right hemisphere 54.2
1841 Female, age 85, right hemisphere 52.9
Subiculum
nTPM: 55.3
1901 Male, age 80, both hemispheres 65.2
2042 Male, age 76, both hemispheres 56.9
2729 Female, age 91, right hemisphere 55.0
1977 Female, age 85, both hemispheres 53.3
2438 Female, age 94, left hemisphere 52.5
2619 Male, age 74, both hemispheres 49.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.8
Samples: 197

Max nTPM: 93.4
Min nTPM: 0.0
Std nTPM: 17.2
Median nTPM: 13.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 93.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 91.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 74.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 66.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 59.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 58.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 57.7
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 54.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 53.5
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 52.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 51.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 110.4
FF:10169-103B7 60 years, female 146.4
FF:10153-102I9 76 years, female 74.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 76.9
Samples: 4

Max nTPM: 90.6
Min nTPM: 42.1
Sample A Female 90.6
Sample B Female 88.3
Sample C Male 42.1
Sample D Male 86.5
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 31.0
Min nTPM: 26.3
Sample A Female 30.7
Sample B Female 28.3
Sample C Male 31.0
Sample D Male 26.3
Subiculum
nTPM: 29.2
Samples: 4

Max nTPM: 37.6
Min nTPM: 25.7
Sample A Female 37.6
Sample B Female 27.2
Sample C Male 25.7
Sample D Male 26.1
Ventral hippocampus
nTPM: 49.0
Samples: 4

Max nTPM: 84.3
Min nTPM: 31.1
Sample A Female 41.5
Sample B Female 31.1
Sample C Male 39.0
Sample D Male 84.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 21.7
Min nTPM: 18.6
Sample A Male 21.7
Sample B Male 20.4
Sample C Female 19.4
Sample D Female 18.6
Hippocampal formation
nTPM: 40.2
Samples: 4

Max nTPM: 49.8
Min nTPM: 30.2
Sample A Male 30.2
Sample B Male 47.0
Sample C Female 49.8
Sample D Female 33.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.