HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:67.7 nTPM
HPA:67.7 nTPM
GTEx:65.7 nTPM
FANTOM5:72.2 Scaled Tags Per Million
Pig:26.3 nTPM
Mouse:47.7 nTPM
Allen mouse:9.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039061Antibody HPA039062Antibody CAB015442Antibody CAB022600
Glial cells HighLowNot detectedLow
Neuronal cells HighMediumMediumHigh









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 67.7
Sample id Sample description nTPM
Hippocampus
nTPM: 57.2
2148 Female, age 91, left hemisphere 64.0
1898 Male, age 80, left hemisphere 59.8
2621 Female, age 67, right hemisphere 58.9
1855 Male, age 76, left hemisphere 58.5
2529 Female, age 94, left hemisphere 51.8
1911 Female, age 85, right hemisphere 49.8
Dentate gyrus
nTPM: 59.4
1927 Female, age 91, both hemispheres 67.9
2531 Female, age 67, both hemispheres 61.0
2528 Male, age 74, both hemispheres 59.9
2246 Female, age 85, both hemispheres 57.1
2010 Male, age 76, both hemispheres 55.9
2530 Female, age 94, left hemisphere 54.6
Entorhinal gyrus
nTPM: 62.2
2613 Female, age 94, left hemisphere 72.0
2764 Male, age 80, right hemisphere 68.3
1938 Female, age 85, left hemisphere 62.6
1787 Male, age 76, left hemisphere 59.6
2686 Male, age 75, right hemisphere 57.4
2117 Female, age 91, right hemisphere 53.4
Hippocampus, CA1
nTPM: 60.7
2749 Male, age 80, left hemisphere 66.5
2527 Male, age 74, both hemispheres 61.7
2082 Female, age 91, right hemisphere 59.5
2045 Male, age 76, both hemispheres 58.7
1873 Female, age 85, both hemispheres 56.9
Hippocampus, CA2
nTPM: 57.9
1892 Male, age 76, both hemispheres 63.1
2249 Male, age 74, both hemispheres 60.6
1963 Male, age 80, left hemisphere 60.2
2113 Female, age 91, right hemisphere 56.0
1940 Female, age 85, left hemisphere 54.3
2437 Female, age 94, left hemisphere 53.1
Hippocampus, CA3
nTPM: 61.3
2436 Male, age 74, both hemispheres 68.2
2620 Female, age 94, left hemisphere 67.3
2137 Male, age 80, left hemisphere 64.0
2861 Female, age 67, both hemispheres 62.2
1867 Male, age 76, both hemispheres 55.7
1891 Female, age 85, both hemispheres 50.5
Parahippocampal cortex
nTPM: 61.5
1850 Male, age 80, both hemispheres 67.4
2622 Female, age 67, right hemisphere 65.8
2245 Female, age 91, both hemispheres 65.6
2693 Female, age 94, both hemispheres 64.1
1990 Female, age 91, right hemisphere 62.1
1933 Female, age 85, both hemispheres 61.9
2532 Female, age 72, left hemisphere 60.6
2250 Female, age 67, right hemisphere 58.9
2692 Male, age 74, both hemispheres 55.0
2018 Male, age 76, both hemispheres 53.1
Perirhinal gyrus
nTPM: 67.7
1847 Female, age 91, left hemisphere 76.0
1794 Male, age 80, right hemisphere 69.7
2521 Female, age 94, right hemisphere 66.1
2848 Male, age 76, right hemisphere 63.5
1841 Female, age 85, right hemisphere 63.0
Subiculum
nTPM: 53.8
1977 Female, age 85, both hemispheres 58.9
2438 Female, age 94, left hemisphere 57.1
2619 Male, age 74, both hemispheres 54.6
2729 Female, age 91, right hemisphere 54.3
1901 Male, age 80, both hemispheres 52.1
2042 Male, age 76, both hemispheres 46.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.7
Samples: 197

Max nTPM: 119.8
Min nTPM: 9.4
Std nTPM: 19.6
Median nTPM: 67.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 119.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 108.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 108.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 105.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 102.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 101.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 100.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 99.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 99.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 98.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 97.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.2
FF:10153-102I9 76 years, female 75.4
FF:10169-103B7 60 years, female 69.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.2
Samples: 4

Max nTPM: 32.6
Min nTPM: 22.2
Sample A Female 32.6
Sample B Female 27.7
Sample C Male 22.4
Sample D Male 22.2
Entorhinal cortex
nTPM: 24.6
Samples: 4

Max nTPM: 28.0
Min nTPM: 22.2
Sample A Female 28.0
Sample B Female 24.6
Sample C Male 23.7
Sample D Male 22.2
Subiculum
nTPM: 26.3
Samples: 4

Max nTPM: 35.8
Min nTPM: 21.9
Sample A Female 35.8
Sample B Female 23.7
Sample C Male 23.8
Sample D Male 21.9
Ventral hippocampus
nTPM: 25.3
Samples: 4

Max nTPM: 30.9
Min nTPM: 19.1
Sample A Female 26.3
Sample B Female 19.1
Sample C Male 30.9
Sample D Male 24.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.7
Samples: 4

Max nTPM: 52.4
Min nTPM: 44.7
Sample A Male 45.8
Sample B Male 48.0
Sample C Female 44.7
Sample D Female 52.4
Hippocampal formation
nTPM: 35.9
Samples: 4

Max nTPM: 36.4
Min nTPM: 34.8
Sample A Male 34.8
Sample B Male 36.4
Sample C Female 36.2
Sample D Female 36.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.4
74580829 Antisense, RP_060215_02_A04, Mouse strain C57BL/6J (56 days, male) 9.4

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