HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.6 nTPM
HPA:19.6 nTPM
GTEx:9.6 nTPM
FANTOM5:15.7 Scaled Tags Per Million
Pig:40.3 nTPM
Mouse:30.6 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061138Antibody CAB046032
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.6
Sample id Sample description nTPM
Hippocampus
nTPM: 2.8
1898 Male, age 80, left hemisphere 5.6
2529 Female, age 94, left hemisphere 4.6
2621 Female, age 67, right hemisphere 2.6
1855 Male, age 76, left hemisphere 1.8
2148 Female, age 91, left hemisphere 1.5
1911 Female, age 85, right hemisphere 0.8
Dentate gyrus
nTPM: 3.2
2246 Female, age 85, both hemispheres 5.5
1927 Female, age 91, both hemispheres 4.7
2528 Male, age 74, both hemispheres 3.0
2530 Female, age 94, left hemisphere 2.9
2531 Female, age 67, both hemispheres 2.4
2010 Male, age 76, both hemispheres 0.9
Entorhinal gyrus
nTPM: 10.4
2764 Male, age 80, right hemisphere 14.7
1938 Female, age 85, left hemisphere 12.7
2613 Female, age 94, left hemisphere 12.7
1787 Male, age 76, left hemisphere 11.9
2686 Male, age 75, right hemisphere 7.1
2117 Female, age 91, right hemisphere 3.4
Hippocampus, CA1
nTPM: 2.9
2082 Female, age 91, right hemisphere 5.3
2527 Male, age 74, both hemispheres 4.7
2045 Male, age 76, both hemispheres 2.2
2749 Male, age 80, left hemisphere 1.4
1873 Female, age 85, both hemispheres 0.8
Hippocampus, CA2
nTPM: 7.6
2249 Male, age 74, both hemispheres 22.1
1892 Male, age 76, both hemispheres 9.1
2437 Female, age 94, left hemisphere 6.7
1963 Male, age 80, left hemisphere 3.0
2113 Female, age 91, right hemisphere 2.4
1940 Female, age 85, left hemisphere 2.0
Hippocampus, CA3
nTPM: 19.6
2436 Male, age 74, both hemispheres 99.2
1867 Male, age 76, both hemispheres 8.2
1891 Female, age 85, both hemispheres 4.5
2137 Male, age 80, left hemisphere 2.5
2861 Female, age 67, both hemispheres 1.9
2620 Female, age 94, left hemisphere 1.0
Parahippocampal cortex
nTPM: 8.7
1850 Male, age 80, both hemispheres 16.7
1933 Female, age 85, both hemispheres 10.3
1990 Female, age 91, right hemisphere 10.2
2250 Female, age 67, right hemisphere 9.1
2532 Female, age 72, left hemisphere 8.6
2693 Female, age 94, both hemispheres 7.7
2622 Female, age 67, right hemisphere 7.5
2692 Male, age 74, both hemispheres 6.4
2245 Female, age 91, both hemispheres 5.8
2018 Male, age 76, both hemispheres 4.7
Perirhinal gyrus
nTPM: 14.5
1847 Female, age 91, left hemisphere 19.9
1794 Male, age 80, right hemisphere 15.0
1841 Female, age 85, right hemisphere 14.9
2848 Male, age 76, right hemisphere 13.8
2521 Female, age 94, right hemisphere 9.2
Subiculum
nTPM: 6.2
1977 Female, age 85, both hemispheres 11.2
2438 Female, age 94, left hemisphere 10.5
1901 Male, age 80, both hemispheres 6.7
2619 Male, age 74, both hemispheres 6.7
2042 Male, age 76, both hemispheres 1.6
2729 Female, age 91, right hemisphere 0.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.6
Samples: 197

Max nTPM: 30.1
Min nTPM: 2.7
Std nTPM: 5.1
Median nTPM: 8.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 30.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 29.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 28.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 25.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 25.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 22.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 21.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 20.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 19.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 18.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 18.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.7
FF:10153-102I9 76 years, female 20.0
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.5
Samples: 4

Max nTPM: 45.6
Min nTPM: 13.8
Sample A Female 35.7
Sample B Female 34.7
Sample C Male 45.6
Sample D Male 13.8
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 29.5
Min nTPM: 22.7
Sample A Female 29.5
Sample B Female 23.6
Sample C Male 28.8
Sample D Male 22.7
Subiculum
nTPM: 39.7
Samples: 4

Max nTPM: 54.7
Min nTPM: 28.2
Sample A Female 41.9
Sample B Female 33.8
Sample C Male 54.7
Sample D Male 28.2
Ventral hippocampus
nTPM: 40.4
Samples: 4

Max nTPM: 55.7
Min nTPM: 30.6
Sample A Female 43.3
Sample B Female 30.6
Sample C Male 55.7
Sample D Male 31.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.6
Samples: 4

Max nTPM: 42.3
Min nTPM: 24.6
Sample A Male 24.6
Sample B Male 27.0
Sample C Female 28.4
Sample D Female 42.3
Hippocampal formation
nTPM: 24.3
Samples: 4

Max nTPM: 42.5
Min nTPM: 16.6
Sample A Male 16.6
Sample B Male 16.9
Sample C Female 21.3
Sample D Female 42.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
68844104 Antisense, RP_050217_02_H07, Mouse strain C57BL/6J (56 days, male) 4.2
75650860 Antisense, RP_060518_02_E01, Mouse strain C57BL/6J (56 days, male) 2.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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