HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:131.1 nTPM
HPA:131.1 nTPM
GTEx:115.1 nTPM
FANTOM5:235.8 Scaled Tags Per Million
Pig:24.0 nTPM
Mouse:89.7 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026077
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 131.1
Sample id Sample description nTPM
Hippocampus
nTPM: 131.1
2529 Female, age 94, left hemisphere 143.1
1911 Female, age 85, right hemisphere 142.3
1898 Male, age 80, left hemisphere 130.3
2148 Female, age 91, left hemisphere 126.6
2621 Female, age 67, right hemisphere 122.3
1855 Male, age 76, left hemisphere 121.9
Dentate gyrus
nTPM: 121.2
2528 Male, age 74, both hemispheres 131.8
2530 Female, age 94, left hemisphere 125.1
1927 Female, age 91, both hemispheres 122.6
2246 Female, age 85, both hemispheres 122.5
2010 Male, age 76, both hemispheres 116.6
2531 Female, age 67, both hemispheres 108.4
Entorhinal gyrus
nTPM: 121.1
2117 Female, age 91, right hemisphere 147.1
1787 Male, age 76, left hemisphere 127.9
1938 Female, age 85, left hemisphere 121.7
2764 Male, age 80, right hemisphere 114.9
2686 Male, age 75, right hemisphere 109.5
2613 Female, age 94, left hemisphere 105.6
Hippocampus, CA1
nTPM: 121.7
2527 Male, age 74, both hemispheres 139.6
1873 Female, age 85, both hemispheres 130.5
2749 Male, age 80, left hemisphere 114.9
2082 Female, age 91, right hemisphere 114.3
2045 Male, age 76, both hemispheres 109.2
Hippocampus, CA2
nTPM: 124.5
1940 Female, age 85, left hemisphere 133.8
2249 Male, age 74, both hemispheres 131.0
2437 Female, age 94, left hemisphere 124.6
1963 Male, age 80, left hemisphere 123.5
2113 Female, age 91, right hemisphere 119.6
1892 Male, age 76, both hemispheres 114.4
Hippocampus, CA3
nTPM: 120.0
1891 Female, age 85, both hemispheres 135.5
2620 Female, age 94, left hemisphere 127.3
2436 Male, age 74, both hemispheres 121.6
1867 Male, age 76, both hemispheres 116.7
2137 Male, age 80, left hemisphere 110.1
2861 Female, age 67, both hemispheres 108.8
Parahippocampal cortex
nTPM: 120.4
2692 Male, age 74, both hemispheres 135.5
2250 Female, age 67, right hemisphere 127.7
1850 Male, age 80, both hemispheres 122.6
2622 Female, age 67, right hemisphere 120.1
2245 Female, age 91, both hemispheres 119.3
1990 Female, age 91, right hemisphere 119.2
1933 Female, age 85, both hemispheres 119.1
2018 Male, age 76, both hemispheres 116.8
2532 Female, age 72, left hemisphere 115.5
2693 Female, age 94, both hemispheres 108.5
Perirhinal gyrus
nTPM: 118.7
1794 Male, age 80, right hemisphere 127.2
1841 Female, age 85, right hemisphere 121.7
2521 Female, age 94, right hemisphere 120.8
1847 Female, age 91, left hemisphere 113.7
2848 Male, age 76, right hemisphere 110.3
Subiculum
nTPM: 131.0
2619 Male, age 74, both hemispheres 143.5
2438 Female, age 94, left hemisphere 141.0
2042 Male, age 76, both hemispheres 131.3
2729 Female, age 91, right hemisphere 128.6
1901 Male, age 80, both hemispheres 122.4
1977 Female, age 85, both hemispheres 119.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 115.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 115.1
Samples: 197

Max nTPM: 205.4
Min nTPM: 41.8
Std nTPM: 32.5
Median nTPM: 109.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 205.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 197.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 192.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 191.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 190.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 189.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 184.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 179.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 177.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 176.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 175.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 235.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 235.8
FF:10153-102I9 76 years, female 261.2
FF:10169-103B7 60 years, female 210.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.1
Samples: 4

Max nTPM: 24.8
Min nTPM: 17.4
Sample A Female 24.8
Sample B Female 17.4
Sample C Male 24.1
Sample D Male 17.9
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 19.6
Min nTPM: 12.8
Sample A Female 13.9
Sample B Female 19.6
Sample C Male 17.9
Sample D Male 12.8
Subiculum
nTPM: 24.0
Samples: 4

Max nTPM: 25.6
Min nTPM: 22.4
Sample A Female 25.3
Sample B Female 25.6
Sample C Male 22.4
Sample D Male 22.5
Ventral hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 22.4
Min nTPM: 16.9
Sample A Female 19.6
Sample B Female 21.4
Sample C Male 22.4
Sample D Male 16.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 89.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.1
Samples: 4

Max nTPM: 77.6
Min nTPM: 39.3
Sample A Male 77.6
Sample B Male 70.2
Sample C Female 65.2
Sample D Female 39.3
Hippocampal formation
nTPM: 89.7
Samples: 4

Max nTPM: 103.5
Min nTPM: 82.9
Sample A Male 87.7
Sample B Male 82.9
Sample C Female 103.5
Sample D Female 84.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
1205 Antisense, RP_040324_01_D01, Mouse strain C57BL/6J (56 days, male) 2.8
1206 Antisense, RP_040324_01_D01, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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