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RPS7
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:866.8 nTPM
HPA:704.7 nTPM
GTEx:866.8 nTPM
FANTOM5:36.7 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA056586
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 704.7
overview
Male, age 65
Small intestine sample 232
nTPM: 840.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 677.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 665.6
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 635.1

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 866.8
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 866.8
Samples: 187

Max nTPM: 2129.8
Min nTPM: 432.2
Std nTPM: 251.5
Median nTPM: 836.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2129.8
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1948.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1624.0
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1590.7
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1552.7
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 1498.9
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1353.2
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1335.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1315.8
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1280.5
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1259.6
GTEX-183FY-1626-SM-793D8 20-29 years, male 1250.5
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1225.6
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1224.6
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1211.5
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1210.9
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1207.1
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1201.3
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1168.3
GTEX-1192X-2526-SM-59868 50-59 years, male 1155.1
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1148.0
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1145.4
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1131.0
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1119.3
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1110.9
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1105.0
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1077.2
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1061.9
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1057.1
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1056.6
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1051.2
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1050.4
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1047.1
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1045.7
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1012.7
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1011.7
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1009.9
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1005.5
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1002.8
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1001.1
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 998.5
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 995.4
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 995.1
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 990.6
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 986.8
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 985.8
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 985.4
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 983.6
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 983.2
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 971.7
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 969.3
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 968.4
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 968.3
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 960.2
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 959.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 954.8
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 951.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 946.2
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 943.9
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 941.4
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 940.8
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 929.6
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 927.0
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 925.7
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 922.8
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 915.9
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 911.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 911.1
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 906.9
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 904.6
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 899.6
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 895.5
GTEX-13O61-1326-SM-5KM31 60-69 years, male 889.6
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 884.4
GTEX-117YX-0326-SM-5GICL 50-59 years, male 877.7
GTEX-14PKU-1626-SM-6871C 40-49 years, female 875.6
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 868.2
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 867.6
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 865.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 864.2
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 863.9
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 863.9
GTEX-1C475-1426-SM-793CH 40-49 years, female 862.3
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 862.3
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 857.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 856.7
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 855.7
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 852.3
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 842.9
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 841.7
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 839.7
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 838.0
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 837.5
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 836.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 831.7
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 831.4
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 830.5
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 824.3
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 822.9
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 822.2
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 822.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 821.5
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 814.8
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 808.6
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 807.0
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 805.4
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 799.8
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 798.9
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 798.9
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 796.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 784.3
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 781.3
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 781.0
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 780.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 779.4
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 774.9
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 772.1
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 772.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 760.4
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 759.5
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 756.6
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 753.7
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 753.4
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 753.3
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 747.3
GTEX-13113-1226-SM-5EGHT 60-69 years, female 745.4
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 743.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 734.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 729.7
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 729.1
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 728.4
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 726.7
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 723.0
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 722.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 720.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 714.2
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 712.7
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 701.6
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 693.2
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 688.0
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 687.3
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 685.9
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 684.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 683.3
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 681.8
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 680.1
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 678.2
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 676.7
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 676.6
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 674.6
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 669.1
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 667.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 661.7
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 661.2
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 647.9
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 646.6
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 645.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 644.1
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 641.7
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 639.3
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 634.6
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 634.2
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 634.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 622.1
GTEX-14PN3-2026-SM-68729 60-69 years, female 618.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 616.4
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 614.1
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 600.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 596.3
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 591.0
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 585.9
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 581.8
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 574.3
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 571.3
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 563.6
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 558.2
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 548.9
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 541.9
GTEX-1122O-1326-SM-5H11F 60-69 years, female 538.7
GTEX-YFCO-1326-SM-664NV 40-49 years, male 523.4
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 522.3
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 487.1
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 479.7
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 479.3
GTEX-ZTSS-0926-SM-59865 40-49 years, male 471.7
GTEX-111YS-1426-SM-5GID8 60-69 years, male 447.9
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 432.2
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 36.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 36.7
FF:10024-101D6 15,40,85 years, mixed 36.7

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