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AQP4
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  • AQP4
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:258.8 nTPM
FANTOM5:839.9 Scaled Tags Per Million
Pig:259.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA014784Antibody CAB005079Antibody CAB058689
Glial cells MediumMediumMedium
Neuronal cells Not detectedNot detectedNot detected






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 258.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 258.8
Samples: 246

Max nTPM: 719.2
Min nTPM: 24.4
Std nTPM: 111.0
Median nTPM: 240.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 719.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 602.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 561.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 552.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 528.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 514.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 505.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 495.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 494.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 491.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 488.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 470.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 464.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 450.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 443.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 443.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 440.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 438.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 434.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 430.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 416.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 410.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 408.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 406.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 399.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 399.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 398.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 391.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 389.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 389.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 387.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 386.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 385.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 383.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 382.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 379.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 379.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 371.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 370.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 367.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 366.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 362.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 360.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 359.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 356.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 353.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 352.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 350.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 347.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 345.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 345.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 344.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 343.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 342.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 337.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 336.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 334.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 333.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 333.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 330.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 328.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 326.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 325.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 319.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 318.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 317.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 315.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 314.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 313.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 313.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 313.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 306.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 301.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 300.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 294.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 290.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 290.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 290.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 289.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 289.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 288.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 288.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 287.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 286.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 286.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 285.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 285.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 284.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 283.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 282.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 281.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 281.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 280.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 279.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 278.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 278.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 277.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 277.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 276.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 275.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 272.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 270.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 270.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 269.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 269.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 267.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 267.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 266.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 265.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 264.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 264.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 262.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 259.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 259.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 258.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 257.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 249.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 247.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 246.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 246.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 245.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 244.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 241.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 240.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 239.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 238.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 238.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 238.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 238.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 237.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 237.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 234.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 229.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 229.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 228.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 227.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 226.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 226.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 226.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 225.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 225.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 223.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 223.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 222.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 221.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 220.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 219.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 219.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 217.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 216.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 214.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 214.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 213.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 211.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 211.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 210.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 210.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 210.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 210.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 206.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 205.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 205.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 205.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 204.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 203.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 202.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 201.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 201.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 200.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 196.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 195.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 195.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 194.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 193.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 192.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 190.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 190.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 189.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 184.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 184.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 183.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 183.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 182.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 180.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 179.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 179.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 176.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 174.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 174.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 173.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 169.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 169.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 168.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 167.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 166.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 164.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 162.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 162.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 161.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 161.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 159.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 158.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 155.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 153.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 153.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 153.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 151.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 150.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 147.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 146.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 146.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 146.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 144.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 144.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 143.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 143.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 142.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 142.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 140.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 139.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 139.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 135.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 135.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 135.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 133.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 132.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 131.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 127.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 126.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 124.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 123.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 113.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 110.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 108.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 103.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 99.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 91.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 88.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 84.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 65.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 64.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 59.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 51.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 33.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 27.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 24.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 839.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 839.9
FF:10164-103B2 76 years, female 839.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 259.1
Pig sample Sample description nTPM
Caudate
nTPM: 259.1
Samples: 4

Max nTPM: 287.9
Min nTPM: 213.5
Sample A Female 266.5
Sample B Female 213.5
Sample C Male 287.9
Sample D Male 268.4

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