HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.1 nTPM
HPA:15.1 nTPM
GTEx:9.8 nTPM
FANTOM5:76.0 Scaled Tags Per Million
Pig:93.6 nTPM
Mouse:107.8 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011894
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.1
Sample id Sample description nTPM
Hippocampus
nTPM: 1.4
1898 Male, age 80, left hemisphere 4.5
1855 Male, age 76, left hemisphere 2.9
1911 Female, age 85, right hemisphere 0.5
2621 Female, age 67, right hemisphere 0.4
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 3.3
1927 Female, age 91, both hemispheres 10.6
2246 Female, age 85, both hemispheres 4.6
2531 Female, age 67, both hemispheres 3.4
2010 Male, age 76, both hemispheres 1.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 5.7
1938 Female, age 85, left hemisphere 13.7
1787 Male, age 76, left hemisphere 6.2
2613 Female, age 94, left hemisphere 5.9
2764 Male, age 80, right hemisphere 4.9
2686 Male, age 75, right hemisphere 3.4
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 4.4
2749 Male, age 80, left hemisphere 9.0
2045 Male, age 76, both hemispheres 6.3
1873 Female, age 85, both hemispheres 4.9
2082 Female, age 91, right hemisphere 1.0
2527 Male, age 74, both hemispheres 0.7
Hippocampus, CA2
nTPM: 4.0
1892 Male, age 76, both hemispheres 16.9
1940 Female, age 85, left hemisphere 4.0
2113 Female, age 91, right hemisphere 1.4
2437 Female, age 94, left hemisphere 1.1
1963 Male, age 80, left hemisphere 0.7
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 4.3
2137 Male, age 80, left hemisphere 14.2
1867 Male, age 76, both hemispheres 5.1
2620 Female, age 94, left hemisphere 4.7
2861 Female, age 67, both hemispheres 1.1
1891 Female, age 85, both hemispheres 0.9
2436 Male, age 74, both hemispheres 0.1
Parahippocampal cortex
nTPM: 6.4
1850 Male, age 80, both hemispheres 16.1
1933 Female, age 85, both hemispheres 10.0
2693 Female, age 94, both hemispheres 10.0
2532 Female, age 72, left hemisphere 5.8
2018 Male, age 76, both hemispheres 5.1
2245 Female, age 91, both hemispheres 4.7
2622 Female, age 67, right hemisphere 4.0
1990 Female, age 91, right hemisphere 3.8
2250 Female, age 67, right hemisphere 3.1
2692 Male, age 74, both hemispheres 1.1
Perirhinal gyrus
nTPM: 15.1
2848 Male, age 76, right hemisphere 23.2
1841 Female, age 85, right hemisphere 19.6
1794 Male, age 80, right hemisphere 15.0
1847 Female, age 91, left hemisphere 11.2
2521 Female, age 94, right hemisphere 6.4
Subiculum
nTPM: 1.6
1977 Female, age 85, both hemispheres 4.8
1901 Male, age 80, both hemispheres 3.6
2438 Female, age 94, left hemisphere 1.3
2619 Male, age 74, both hemispheres 0.3
2042 Male, age 76, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.8
Samples: 197

Max nTPM: 32.2
Min nTPM: 1.5
Std nTPM: 5.7
Median nTPM: 8.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 32.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 31.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 30.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 29.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 25.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 22.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 22.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 22.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 21.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 21.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 21.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.0
FF:10169-103B7 60 years, female 84.7
FF:10153-102I9 76 years, female 67.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 93.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 59.8
Samples: 4

Max nTPM: 76.8
Min nTPM: 39.4
Sample A Female 58.5
Sample B Female 64.6
Sample C Male 39.4
Sample D Male 76.8
Entorhinal cortex
nTPM: 93.6
Samples: 4

Max nTPM: 105.5
Min nTPM: 81.0
Sample A Female 100.4
Sample B Female 105.5
Sample C Male 87.6
Sample D Male 81.0
Subiculum
nTPM: 78.6
Samples: 4

Max nTPM: 88.1
Min nTPM: 68.6
Sample A Female 75.3
Sample B Female 68.6
Sample C Male 88.1
Sample D Male 82.2
Ventral hippocampus
nTPM: 62.4
Samples: 4

Max nTPM: 69.8
Min nTPM: 52.3
Sample A Female 57.8
Sample B Female 69.5
Sample C Male 69.8
Sample D Male 52.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 107.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 107.8
Samples: 4

Max nTPM: 140.2
Min nTPM: 86.8
Sample A Male 95.3
Sample B Male 109.0
Sample C Female 86.8
Sample D Female 140.2
Hippocampal formation
nTPM: 62.8
Samples: 4

Max nTPM: 71.0
Min nTPM: 56.1
Sample A Male 71.0
Sample B Male 66.9
Sample C Female 57.0
Sample D Female 56.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
692 Antisense, RP_Baylor_103417, Mouse strain C57BL/6J (56 days, male) 5.4
694 Antisense, RP_Baylor_103417, Mouse strain C57BL/6J (56 days, male) 3.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.