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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:505.1 nTPM
FANTOM5:371.5 Scaled Tags Per Million
Pig:108.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA036048Antibody CAB002427
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 505.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 505.1
Samples: 246

Max nTPM: 1948.3
Min nTPM: 180.6
Std nTPM: 185.4
Median nTPM: 468.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1948.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1384.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1080.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1068.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 946.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 937.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 918.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 911.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 907.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 900.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 872.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 864.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 859.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 837.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 817.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 796.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 791.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 789.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 786.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 716.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 711.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 700.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 699.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 698.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 694.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 693.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 687.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 679.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 674.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 673.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 666.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 664.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 660.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 659.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 657.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 656.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 656.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 653.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 635.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 634.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 632.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 628.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 626.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 618.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 610.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 607.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 606.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 603.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 602.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 602.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 599.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 597.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 595.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 595.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 593.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 586.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 579.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 577.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 568.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 568.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 564.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 562.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 562.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 561.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 558.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 556.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 553.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 552.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 549.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 546.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 544.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 544.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 538.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 532.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 531.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 531.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 530.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 530.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 529.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 529.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 528.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 527.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 526.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 524.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 523.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 522.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 522.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 521.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 520.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 519.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 514.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 510.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 509.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 505.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 500.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 500.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 495.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 495.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 495.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 495.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 494.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 490.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 486.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 485.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 484.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 484.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 481.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 481.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 481.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 480.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 480.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 480.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 480.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 478.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 475.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 474.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 473.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 473.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 472.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 472.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 469.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 468.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 468.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 467.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 467.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 467.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 466.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 465.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 464.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 463.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 462.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 457.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 456.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 454.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 451.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 450.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 449.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 448.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 446.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 446.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 445.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 444.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 444.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 444.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 442.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 441.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 441.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 439.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 439.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 437.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 433.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 431.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 431.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 429.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 427.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 427.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 426.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 422.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 421.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 421.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 419.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 418.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 418.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 417.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 416.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 416.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 411.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 411.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 409.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 409.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 408.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 407.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 407.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 406.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 406.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 401.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 400.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 400.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 398.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 398.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 397.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 397.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 394.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 394.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 394.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 392.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 392.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 391.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 390.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 387.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 386.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 385.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 384.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 382.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 378.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 377.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 377.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 376.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 375.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 374.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 371.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 370.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 370.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 370.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 365.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 364.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 361.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 360.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 360.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 359.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 358.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 358.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 358.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 357.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 357.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 355.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 354.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 351.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 351.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 343.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 343.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 342.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 341.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 337.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 337.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 335.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 326.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 325.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 325.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 325.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 322.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 322.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 318.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 317.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 315.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 314.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 313.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 313.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 289.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 288.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 278.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 273.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 260.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 214.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 209.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 180.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 371.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 371.5
FF:10164-103B2 76 years, female 371.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 108.1
Pig sample Sample description nTPM
Caudate
nTPM: 108.1
Samples: 4

Max nTPM: 134.2
Min nTPM: 88.9
Sample A Female 88.9
Sample B Female 112.1
Sample C Male 134.2
Sample D Male 97.0

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