HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.2 nTPM
HPA:14.2 nTPM
GTEx:13.9 nTPM
FANTOM5:23.8 Scaled Tags Per Million
Pig:19.8 nTPM
Mouse:23.7 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046705Antibody HPA051998
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.2
Sample id Sample description nTPM
Hippocampus
nTPM: 14.2
1911 Female, age 85, right hemisphere 14.8
2529 Female, age 94, left hemisphere 14.4
1898 Male, age 80, left hemisphere 14.3
2148 Female, age 91, left hemisphere 14.2
1855 Male, age 76, left hemisphere 14.1
2621 Female, age 67, right hemisphere 13.5
Dentate gyrus
nTPM: 12.8
2528 Male, age 74, both hemispheres 14.0
2246 Female, age 85, both hemispheres 13.4
2010 Male, age 76, both hemispheres 13.3
2530 Female, age 94, left hemisphere 12.6
1927 Female, age 91, both hemispheres 12.3
2531 Female, age 67, both hemispheres 11.2
Entorhinal gyrus
nTPM: 13.0
2117 Female, age 91, right hemisphere 15.4
1938 Female, age 85, left hemisphere 13.5
1787 Male, age 76, left hemisphere 12.8
2686 Male, age 75, right hemisphere 12.6
2764 Male, age 80, right hemisphere 11.9
2613 Female, age 94, left hemisphere 11.7
Hippocampus, CA1
nTPM: 13.2
2527 Male, age 74, both hemispheres 14.5
1873 Female, age 85, both hemispheres 13.8
2082 Female, age 91, right hemisphere 13.6
2045 Male, age 76, both hemispheres 12.7
2749 Male, age 80, left hemisphere 11.4
Hippocampus, CA2
nTPM: 13.6
2249 Male, age 74, both hemispheres 14.7
2113 Female, age 91, right hemisphere 14.5
1940 Female, age 85, left hemisphere 14.2
1963 Male, age 80, left hemisphere 13.2
2437 Female, age 94, left hemisphere 13.0
1892 Male, age 76, both hemispheres 12.2
Hippocampus, CA3
nTPM: 13.0
2436 Male, age 74, both hemispheres 15.3
1891 Female, age 85, both hemispheres 14.6
1867 Male, age 76, both hemispheres 13.3
2861 Female, age 67, both hemispheres 12.3
2137 Male, age 80, left hemisphere 11.7
2620 Female, age 94, left hemisphere 10.6
Parahippocampal cortex
nTPM: 13.3
2018 Male, age 76, both hemispheres 14.5
2250 Female, age 67, right hemisphere 14.4
2622 Female, age 67, right hemisphere 13.9
2692 Male, age 74, both hemispheres 13.6
1933 Female, age 85, both hemispheres 13.2
2245 Female, age 91, both hemispheres 13.1
1990 Female, age 91, right hemisphere 12.9
1850 Male, age 80, both hemispheres 12.8
2693 Female, age 94, both hemispheres 12.6
2532 Female, age 72, left hemisphere 12.0
Perirhinal gyrus
nTPM: 12.3
1847 Female, age 91, left hemisphere 12.9
1841 Female, age 85, right hemisphere 12.6
1794 Male, age 80, right hemisphere 12.3
2521 Female, age 94, right hemisphere 12.1
2848 Male, age 76, right hemisphere 11.8
Subiculum
nTPM: 13.9
2729 Female, age 91, right hemisphere 16.0
2042 Male, age 76, both hemispheres 14.9
2619 Male, age 74, both hemispheres 13.8
2438 Female, age 94, left hemisphere 13.4
1901 Male, age 80, both hemispheres 12.8
1977 Female, age 85, both hemispheres 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 32.5
Min nTPM: 5.6
Std nTPM: 4.7
Median nTPM: 13.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 32.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 28.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 28.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 27.4
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 26.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 25.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 25.0
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 24.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 24.0
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 23.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 22.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.8
FF:10153-102I9 76 years, female 26.8
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 22.7
Min nTPM: 16.4
Sample A Female 22.7
Sample B Female 16.4
Sample C Male 19.3
Sample D Male 17.0
Entorhinal cortex
nTPM: 17.1
Samples: 4

Max nTPM: 20.1
Min nTPM: 14.0
Sample A Female 16.7
Sample B Female 20.1
Sample C Male 17.4
Sample D Male 14.0
Subiculum
nTPM: 19.8
Samples: 4

Max nTPM: 23.4
Min nTPM: 15.9
Sample A Female 23.4
Sample B Female 19.9
Sample C Male 15.9
Sample D Male 19.9
Ventral hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 18.0
Min nTPM: 15.2
Sample A Female 17.5
Sample B Female 17.8
Sample C Male 15.2
Sample D Male 18.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.7
Samples: 4

Max nTPM: 25.2
Min nTPM: 22.0
Sample A Male 23.4
Sample B Male 22.0
Sample C Female 24.3
Sample D Female 25.2
Hippocampal formation
nTPM: 19.3
Samples: 4

Max nTPM: 24.2
Min nTPM: 16.4
Sample A Male 24.2
Sample B Male 16.5
Sample C Female 16.4
Sample D Female 20.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69887445 Antisense, RP_050512_03_F12, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.