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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:189.1 nTPM
FANTOM5:100.2 Scaled Tags Per Million
Pig:86.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA040736Antibody CAB010032
Glial cells Not detectedNot detected
Neuronal cells LowLow


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 189.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 189.1
Samples: 246

Max nTPM: 305.3
Min nTPM: 84.0
Std nTPM: 37.1
Median nTPM: 186.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 305.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 297.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 281.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 270.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 264.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 264.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 261.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 258.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 257.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 256.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 256.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 255.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 254.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 251.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 250.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 250.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 249.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 248.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 247.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 247.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 247.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 246.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 243.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 242.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 241.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 241.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 240.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 239.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 239.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 238.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 237.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 237.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 236.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 235.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 235.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 235.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 230.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 229.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 229.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 227.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 226.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 225.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 225.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 223.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 222.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 221.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 220.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 220.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 220.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 219.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 219.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 217.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 216.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 216.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 215.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 214.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 214.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 213.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 212.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 211.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 209.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 209.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 209.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 209.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 209.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 209.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 208.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 208.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 208.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 208.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 207.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 206.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 205.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 205.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 205.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 204.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 204.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 204.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 204.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 203.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 203.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 203.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 201.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 201.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 200.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 200.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 200.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 199.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 198.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 198.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 197.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 197.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 197.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 197.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 196.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 196.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 196.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 196.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 195.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 195.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 194.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 193.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 193.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 193.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 193.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 193.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 193.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 192.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 191.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 190.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 190.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 189.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 189.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 189.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 189.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 188.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 188.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 187.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 187.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 187.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 187.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 187.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 186.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 186.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 186.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 186.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 185.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 184.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 184.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 184.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 184.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 183.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 183.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 183.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 182.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 181.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 181.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 181.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 180.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 180.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 180.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 179.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 179.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 179.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 179.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 178.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 178.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 178.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 178.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 178.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 177.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 177.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 176.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 176.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 175.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 175.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 175.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 174.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 173.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 173.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 173.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 172.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 171.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 170.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 170.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 169.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 169.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 169.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 169.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 169.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 168.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 168.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 168.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 168.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 167.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 167.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 166.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 166.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 165.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 165.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 165.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 164.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 164.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 164.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 163.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 163.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 163.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 163.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 162.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 161.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 161.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 161.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 160.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 160.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 160.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 160.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 159.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 157.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 157.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 156.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 156.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 156.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 155.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 155.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 155.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 155.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 155.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 154.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 153.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 152.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 152.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 151.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 151.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 151.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 151.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 150.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 150.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 149.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 148.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 144.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 144.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 143.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 142.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 140.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 139.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 139.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 137.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 136.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 136.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 136.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 135.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 135.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 134.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 133.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 133.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 131.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 131.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 129.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 124.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 123.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 120.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 117.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 114.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 100.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 98.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 84.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 100.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 100.2
FF:10164-103B2 76 years, female 100.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 86.1
Pig sample Sample description nTPM
Caudate
nTPM: 86.1
Samples: 4

Max nTPM: 100.6
Min nTPM: 68.0
Sample A Female 68.0
Sample B Female 95.5
Sample C Male 100.6
Sample D Male 80.4

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