HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:66.0 nTPM
HPA:66.0 nTPM
GTEx:93.1 nTPM
FANTOM5:15.4 Scaled Tags Per Million
Pig:6.6 nTPM
Mouse:6.4 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.0
Sample id Sample description nTPM
Hippocampus
nTPM: 66.0
2529 Female, age 94, left hemisphere 79.2
2148 Female, age 91, left hemisphere 73.9
1898 Male, age 80, left hemisphere 64.0
1911 Female, age 85, right hemisphere 63.5
1855 Male, age 76, left hemisphere 58.6
2621 Female, age 67, right hemisphere 56.8
Dentate gyrus
nTPM: 58.7
2528 Male, age 74, both hemispheres 73.9
2530 Female, age 94, left hemisphere 66.3
2531 Female, age 67, both hemispheres 56.7
1927 Female, age 91, both hemispheres 54.9
2010 Male, age 76, both hemispheres 52.9
2246 Female, age 85, both hemispheres 47.4
Entorhinal gyrus
nTPM: 53.0
2117 Female, age 91, right hemisphere 63.0
2686 Male, age 75, right hemisphere 54.9
1938 Female, age 85, left hemisphere 51.9
2764 Male, age 80, right hemisphere 50.7
1787 Male, age 76, left hemisphere 50.3
2613 Female, age 94, left hemisphere 47.1
Hippocampus, CA1
nTPM: 52.6
1873 Female, age 85, both hemispheres 61.9
2527 Male, age 74, both hemispheres 59.2
2082 Female, age 91, right hemisphere 54.8
2045 Male, age 76, both hemispheres 46.2
2749 Male, age 80, left hemisphere 40.9
Hippocampus, CA2
nTPM: 56.9
2113 Female, age 91, right hemisphere 63.8
2249 Male, age 74, both hemispheres 63.7
1963 Male, age 80, left hemisphere 58.0
2437 Female, age 94, left hemisphere 55.8
1892 Male, age 76, both hemispheres 51.2
1940 Female, age 85, left hemisphere 49.0
Hippocampus, CA3
nTPM: 54.2
2861 Female, age 67, both hemispheres 75.5
2620 Female, age 94, left hemisphere 63.8
1891 Female, age 85, both hemispheres 55.0
1867 Male, age 76, both hemispheres 48.2
2436 Male, age 74, both hemispheres 43.4
2137 Male, age 80, left hemisphere 39.5
Parahippocampal cortex
nTPM: 50.4
2622 Female, age 67, right hemisphere 59.2
2692 Male, age 74, both hemispheres 55.8
1990 Female, age 91, right hemisphere 53.3
2245 Female, age 91, both hemispheres 51.7
1850 Male, age 80, both hemispheres 50.3
2018 Male, age 76, both hemispheres 48.7
2532 Female, age 72, left hemisphere 48.5
2250 Female, age 67, right hemisphere 48.0
1933 Female, age 85, both hemispheres 46.0
2693 Female, age 94, both hemispheres 42.2
Perirhinal gyrus
nTPM: 50.7
1794 Male, age 80, right hemisphere 54.1
1841 Female, age 85, right hemisphere 51.9
1847 Female, age 91, left hemisphere 51.1
2521 Female, age 94, right hemisphere 50.7
2848 Male, age 76, right hemisphere 45.5
Subiculum
nTPM: 57.3
2729 Female, age 91, right hemisphere 79.4
2619 Male, age 74, both hemispheres 61.9
2438 Female, age 94, left hemisphere 53.2
1977 Female, age 85, both hemispheres 52.5
1901 Male, age 80, both hemispheres 49.4
2042 Male, age 76, both hemispheres 47.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.1
Samples: 197

Max nTPM: 193.5
Min nTPM: 13.4
Std nTPM: 27.9
Median nTPM: 92.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 193.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 190.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 184.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 154.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 149.5
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 147.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 143.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 141.8
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 141.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 138.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 137.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.4
FF:10153-102I9 76 years, female 20.5
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.5
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.1
Sample A Female 6.9
Sample B Female 7.4
Sample C Male 5.1
Sample D Male 6.6
Entorhinal cortex
nTPM: 6.5
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.5
Sample A Female 6.9
Sample B Female 7.2
Sample C Male 6.3
Sample D Male 5.5
Subiculum
nTPM: 6.2
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.5
Sample A Female 7.3
Sample B Female 5.5
Sample C Male 6.2
Sample D Male 5.6
Ventral hippocampus
nTPM: 6.6
Samples: 4

Max nTPM: 7.6
Min nTPM: 5.2
Sample A Female 5.2
Sample B Female 6.5
Sample C Male 7.6
Sample D Male 7.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 8.5
Min nTPM: 5.1
Sample A Male 5.8
Sample B Male 8.5
Sample C Female 5.1
Sample D Female 6.3
Hippocampal formation
nTPM: 5.0
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.3
Sample A Male 4.7
Sample B Male 6.5
Sample C Female 4.3
Sample D Female 4.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
75990861 Antisense, RP_060608_01_F10, Mouse strain C57BL/6J (56 days, male) 0.2

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