HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.0 nTPM
HPA:51.0 nTPM
GTEx:54.3 nTPM
FANTOM5:43.4 Scaled Tags Per Million
Pig:23.4 nTPM
Mouse:45.2 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011729
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.0
Sample id Sample description nTPM
Hippocampus
nTPM: 44.7
1898 Male, age 80, left hemisphere 50.5
2621 Female, age 67, right hemisphere 44.9
1855 Male, age 76, left hemisphere 44.5
2529 Female, age 94, left hemisphere 43.6
2148 Female, age 91, left hemisphere 43.2
1911 Female, age 85, right hemisphere 41.6
Dentate gyrus
nTPM: 45.3
2530 Female, age 94, left hemisphere 50.4
1927 Female, age 91, both hemispheres 48.1
2010 Male, age 76, both hemispheres 45.3
2528 Male, age 74, both hemispheres 44.1
2246 Female, age 85, both hemispheres 42.3
2531 Female, age 67, both hemispheres 41.5
Entorhinal gyrus
nTPM: 47.3
2764 Male, age 80, right hemisphere 52.2
2613 Female, age 94, left hemisphere 49.9
1938 Female, age 85, left hemisphere 48.6
1787 Male, age 76, left hemisphere 46.1
2117 Female, age 91, right hemisphere 44.5
2686 Male, age 75, right hemisphere 42.3
Hippocampus, CA1
nTPM: 46.9
2749 Male, age 80, left hemisphere 60.2
2527 Male, age 74, both hemispheres 46.5
1873 Female, age 85, both hemispheres 44.8
2082 Female, age 91, right hemisphere 42.5
2045 Male, age 76, both hemispheres 40.4
Hippocampus, CA2
nTPM: 47.0
1892 Male, age 76, both hemispheres 51.5
1963 Male, age 80, left hemisphere 50.8
2437 Female, age 94, left hemisphere 49.0
2249 Male, age 74, both hemispheres 46.4
1940 Female, age 85, left hemisphere 42.2
2113 Female, age 91, right hemisphere 42.1
Hippocampus, CA3
nTPM: 45.4
2137 Male, age 80, left hemisphere 51.2
1867 Male, age 76, both hemispheres 47.9
2436 Male, age 74, both hemispheres 46.8
1891 Female, age 85, both hemispheres 42.8
2861 Female, age 67, both hemispheres 42.3
2620 Female, age 94, left hemisphere 41.5
Parahippocampal cortex
nTPM: 46.6
1850 Male, age 80, both hemispheres 50.6
1990 Female, age 91, right hemisphere 47.8
2245 Female, age 91, both hemispheres 47.7
1933 Female, age 85, both hemispheres 47.5
2250 Female, age 67, right hemisphere 47.4
2692 Male, age 74, both hemispheres 46.4
2532 Female, age 72, left hemisphere 45.8
2693 Female, age 94, both hemispheres 45.5
2622 Female, age 67, right hemisphere 43.9
2018 Male, age 76, both hemispheres 43.0
Perirhinal gyrus
nTPM: 51.0
1847 Female, age 91, left hemisphere 57.6
1794 Male, age 80, right hemisphere 51.3
1841 Female, age 85, right hemisphere 50.9
2521 Female, age 94, right hemisphere 49.5
2848 Male, age 76, right hemisphere 45.5
Subiculum
nTPM: 45.1
1977 Female, age 85, both hemispheres 48.1
2438 Female, age 94, left hemisphere 46.9
2619 Male, age 74, both hemispheres 46.8
1901 Male, age 80, both hemispheres 46.4
2042 Male, age 76, both hemispheres 41.5
2729 Female, age 91, right hemisphere 41.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.3
Samples: 197

Max nTPM: 105.8
Min nTPM: 24.3
Std nTPM: 14.9
Median nTPM: 51.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 105.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 96.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 94.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 93.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 93.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 89.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 84.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 84.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 80.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 80.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 80.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.4
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 30.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 27.5
Min nTPM: 17.7
Sample A Female 27.5
Sample B Female 22.3
Sample C Male 25.9
Sample D Male 17.7
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 25.6
Min nTPM: 17.9
Sample A Female 23.2
Sample B Female 25.6
Sample C Male 22.4
Sample D Male 17.9
Subiculum
nTPM: 20.6
Samples: 4

Max nTPM: 24.8
Min nTPM: 17.9
Sample A Female 24.8
Sample B Female 19.7
Sample C Male 20.0
Sample D Male 17.9
Ventral hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 30.6
Min nTPM: 16.6
Sample A Female 22.4
Sample B Female 16.6
Sample C Male 30.6
Sample D Male 23.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.3
Samples: 4

Max nTPM: 45.1
Min nTPM: 39.6
Sample A Male 39.6
Sample B Male 42.1
Sample C Female 42.2
Sample D Female 45.1
Hippocampal formation
nTPM: 45.2
Samples: 4

Max nTPM: 51.1
Min nTPM: 42.0
Sample A Male 51.1
Sample B Male 42.0
Sample C Female 42.1
Sample D Female 45.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68633279 Antisense, RP_050125_02_F04, Mouse strain C57BL/6J (56 days, male) 1.2
70919328 Antisense, RP_050713_01_B03, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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