HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:107.7 nTPM
HPA:107.7 nTPM
GTEx:100.2 nTPM
FANTOM5:100.6 Scaled Tags Per Million
Pig:15.5 nTPM
Mouse:70.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012319
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 107.7
Sample id Sample description nTPM
Hippocampus
nTPM: 107.1
1898 Male, age 80, left hemisphere 111.4
2621 Female, age 67, right hemisphere 109.7
2529 Female, age 94, left hemisphere 107.5
1855 Male, age 76, left hemisphere 106.9
2148 Female, age 91, left hemisphere 106.5
1911 Female, age 85, right hemisphere 100.8
Dentate gyrus
nTPM: 106.9
2010 Male, age 76, both hemispheres 113.6
2530 Female, age 94, left hemisphere 109.9
2528 Male, age 74, both hemispheres 108.0
1927 Female, age 91, both hemispheres 105.0
2246 Female, age 85, both hemispheres 103.7
2531 Female, age 67, both hemispheres 101.2
Entorhinal gyrus
nTPM: 103.9
2764 Male, age 80, right hemisphere 107.9
1787 Male, age 76, left hemisphere 105.1
2117 Female, age 91, right hemisphere 104.4
1938 Female, age 85, left hemisphere 103.4
2686 Male, age 75, right hemisphere 101.6
2613 Female, age 94, left hemisphere 101.3
Hippocampus, CA1
nTPM: 107.7
2749 Male, age 80, left hemisphere 112.8
2527 Male, age 74, both hemispheres 109.1
1873 Female, age 85, both hemispheres 109.0
2045 Male, age 76, both hemispheres 105.2
2082 Female, age 91, right hemisphere 102.4
Hippocampus, CA2
nTPM: 107.3
1963 Male, age 80, left hemisphere 110.2
2249 Male, age 74, both hemispheres 110.1
1892 Male, age 76, both hemispheres 109.8
2437 Female, age 94, left hemisphere 107.8
2113 Female, age 91, right hemisphere 103.2
1940 Female, age 85, left hemisphere 102.9
Hippocampus, CA3
nTPM: 105.8
1867 Male, age 76, both hemispheres 107.5
2436 Male, age 74, both hemispheres 106.8
1891 Female, age 85, both hemispheres 105.3
2137 Male, age 80, left hemisphere 105.2
2620 Female, age 94, left hemisphere 105.2
2861 Female, age 67, both hemispheres 104.8
Parahippocampal cortex
nTPM: 104.0
2250 Female, age 67, right hemisphere 109.5
2018 Male, age 76, both hemispheres 106.0
2245 Female, age 91, both hemispheres 104.2
1990 Female, age 91, right hemisphere 103.5
2532 Female, age 72, left hemisphere 103.5
2692 Male, age 74, both hemispheres 103.5
1850 Male, age 80, both hemispheres 103.3
1933 Female, age 85, both hemispheres 103.2
2622 Female, age 67, right hemisphere 102.8
2693 Female, age 94, both hemispheres 100.2
Perirhinal gyrus
nTPM: 103.1
1847 Female, age 91, left hemisphere 108.6
1841 Female, age 85, right hemisphere 103.6
2521 Female, age 94, right hemisphere 101.4
1794 Male, age 80, right hemisphere 101.2
2848 Male, age 76, right hemisphere 100.5
Subiculum
nTPM: 105.2
1977 Female, age 85, both hemispheres 107.5
2619 Male, age 74, both hemispheres 107.3
2438 Female, age 94, left hemisphere 105.3
2042 Male, age 76, both hemispheres 104.1
1901 Male, age 80, both hemispheres 103.7
2729 Female, age 91, right hemisphere 103.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 100.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 100.2
Samples: 197

Max nTPM: 244.3
Min nTPM: 42.8
Std nTPM: 26.6
Median nTPM: 96.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 244.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 182.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 174.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 174.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 167.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 162.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 153.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 150.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 149.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 148.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 146.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.6
FF:10169-103B7 60 years, female 130.7
FF:10153-102I9 76 years, female 70.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 21.0
Min nTPM: 11.2
Sample A Female 21.0
Sample B Female 14.0
Sample C Male 15.7
Sample D Male 11.2
Entorhinal cortex
nTPM: 11.4
Samples: 4

Max nTPM: 13.4
Min nTPM: 8.7
Sample A Female 11.5
Sample B Female 13.4
Sample C Male 11.8
Sample D Male 8.7
Subiculum
nTPM: 12.8
Samples: 4

Max nTPM: 18.1
Min nTPM: 10.4
Sample A Female 18.1
Sample B Female 11.8
Sample C Male 10.4
Sample D Male 10.8
Ventral hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 17.3
Min nTPM: 10.8
Sample A Female 14.6
Sample B Female 10.8
Sample C Male 17.3
Sample D Male 15.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.6
Samples: 4

Max nTPM: 70.2
Min nTPM: 48.0
Sample A Male 62.9
Sample B Male 70.2
Sample C Female 61.1
Sample D Female 48.0
Hippocampal formation
nTPM: 70.9
Samples: 4

Max nTPM: 77.3
Min nTPM: 58.6
Sample A Male 72.4
Sample B Male 75.2
Sample C Female 58.6
Sample D Female 77.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
71020801 Antisense, RP_050505_01_G08, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.