HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:26.8 nTPM
HPA:26.8 nTPM
GTEx:17.9 nTPM
FANTOM5:10.4 Scaled Tags Per Million
Pig:14.8 nTPM
Mouse:20.6 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.8
Sample id Sample description nTPM
Hippocampus
nTPM: 18.4
1898 Male, age 80, left hemisphere 20.2
2621 Female, age 67, right hemisphere 19.9
2148 Female, age 91, left hemisphere 18.2
2529 Female, age 94, left hemisphere 17.4
1855 Male, age 76, left hemisphere 17.2
1911 Female, age 85, right hemisphere 17.2
Dentate gyrus
nTPM: 17.3
2528 Male, age 74, both hemispheres 18.6
1927 Female, age 91, both hemispheres 18.2
2246 Female, age 85, both hemispheres 17.8
2531 Female, age 67, both hemispheres 16.8
2010 Male, age 76, both hemispheres 16.4
2530 Female, age 94, left hemisphere 16.2
Entorhinal gyrus
nTPM: 22.6
2764 Male, age 80, right hemisphere 26.4
1938 Female, age 85, left hemisphere 24.2
2613 Female, age 94, left hemisphere 23.7
2686 Male, age 75, right hemisphere 21.0
1787 Male, age 76, left hemisphere 20.5
2117 Female, age 91, right hemisphere 19.9
Hippocampus, CA1
nTPM: 18.5
2527 Male, age 74, both hemispheres 22.5
1873 Female, age 85, both hemispheres 17.9
2082 Female, age 91, right hemisphere 17.7
2749 Male, age 80, left hemisphere 17.7
2045 Male, age 76, both hemispheres 16.6
Hippocampus, CA2
nTPM: 18.5
2113 Female, age 91, right hemisphere 19.7
2249 Male, age 74, both hemispheres 19.5
1940 Female, age 85, left hemisphere 19.3
2437 Female, age 94, left hemisphere 18.6
1892 Male, age 76, both hemispheres 17.1
1963 Male, age 80, left hemisphere 16.6
Hippocampus, CA3
nTPM: 17.7
2861 Female, age 67, both hemispheres 19.7
1867 Male, age 76, both hemispheres 18.3
1891 Female, age 85, both hemispheres 18.1
2436 Male, age 74, both hemispheres 17.4
2620 Female, age 94, left hemisphere 16.9
2137 Male, age 80, left hemisphere 15.9
Parahippocampal cortex
nTPM: 24.0
1850 Male, age 80, both hemispheres 28.1
2532 Female, age 72, left hemisphere 28.1
1933 Female, age 85, both hemispheres 25.2
1990 Female, age 91, right hemisphere 24.3
2245 Female, age 91, both hemispheres 24.3
2622 Female, age 67, right hemisphere 24.3
2250 Female, age 67, right hemisphere 22.1
2693 Female, age 94, both hemispheres 21.7
2692 Male, age 74, both hemispheres 21.6
2018 Male, age 76, both hemispheres 20.1
Perirhinal gyrus
nTPM: 26.8
1794 Male, age 80, right hemisphere 32.4
1841 Female, age 85, right hemisphere 30.5
1847 Female, age 91, left hemisphere 29.9
2848 Male, age 76, right hemisphere 21.1
2521 Female, age 94, right hemisphere 19.8
Subiculum
nTPM: 19.8
2619 Male, age 74, both hemispheres 23.6
1977 Female, age 85, both hemispheres 21.1
2042 Male, age 76, both hemispheres 19.1
1901 Male, age 80, both hemispheres 18.6
2438 Female, age 94, left hemisphere 18.2
2729 Female, age 91, right hemisphere 18.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.9
Samples: 197

Max nTPM: 143.3
Min nTPM: 3.1
Std nTPM: 17.2
Median nTPM: 12.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 143.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 110.2
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 105.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 71.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 56.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 55.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 51.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 48.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 46.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 46.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 45.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.4
FF:10153-102I9 76 years, female 14.5
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 7.6
Min nTPM: 6.4
Sample A Female 7.6
Sample B Female 6.5
Sample C Male 6.9
Sample D Male 6.4
Entorhinal cortex
nTPM: 14.8
Samples: 4

Max nTPM: 16.6
Min nTPM: 13.1
Sample A Female 16.6
Sample B Female 14.8
Sample C Male 13.1
Sample D Male 14.8
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.4
Sample A Female 11.9
Sample B Female 10.7
Sample C Male 9.4
Sample D Male 10.0
Ventral hippocampus
nTPM: 8.4
Samples: 4

Max nTPM: 10.3
Min nTPM: 7.2
Sample A Female 8.5
Sample B Female 7.7
Sample C Male 10.3
Sample D Male 7.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 27.0
Min nTPM: 17.7
Sample A Male 18.7
Sample B Male 27.0
Sample C Female 17.7
Sample D Female 18.9
Hippocampal formation
nTPM: 9.6
Samples: 4

Max nTPM: 12.7
Min nTPM: 6.6
Sample A Male 12.7
Sample B Male 9.0
Sample C Female 6.6
Sample D Female 10.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69113620 Antisense, RP_050316_02_D11, Mouse strain C57BL/6J (56 days, male) 0.7

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