HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:23.7 nTPM
HPA:23.7 nTPM
GTEx:15.1 nTPM
FANTOM5:17.5 Scaled Tags Per Million
Pig:8.5 nTPM
Mouse:48.5 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041775
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.7
Sample id Sample description nTPM
Hippocampus
nTPM: 21.8
2621 Female, age 67, right hemisphere 23.5
2148 Female, age 91, left hemisphere 22.8
1911 Female, age 85, right hemisphere 22.6
2529 Female, age 94, left hemisphere 21.0
1855 Male, age 76, left hemisphere 20.3
1898 Male, age 80, left hemisphere 20.2
Dentate gyrus
nTPM: 22.0
2531 Female, age 67, both hemispheres 25.0
1927 Female, age 91, both hemispheres 24.1
2246 Female, age 85, both hemispheres 22.1
2528 Male, age 74, both hemispheres 21.3
2010 Male, age 76, both hemispheres 19.8
2530 Female, age 94, left hemisphere 19.6
Entorhinal gyrus
nTPM: 22.9
2613 Female, age 94, left hemisphere 27.7
2686 Male, age 75, right hemisphere 23.9
1787 Male, age 76, left hemisphere 22.9
2764 Male, age 80, right hemisphere 22.5
1938 Female, age 85, left hemisphere 21.7
2117 Female, age 91, right hemisphere 18.6
Hippocampus, CA1
nTPM: 23.0
2749 Male, age 80, left hemisphere 25.8
2045 Male, age 76, both hemispheres 23.4
2527 Male, age 74, both hemispheres 22.6
1873 Female, age 85, both hemispheres 21.7
2082 Female, age 91, right hemisphere 21.5
Hippocampus, CA2
nTPM: 21.3
1892 Male, age 76, both hemispheres 23.0
2113 Female, age 91, right hemisphere 21.7
1940 Female, age 85, left hemisphere 21.3
2249 Male, age 74, both hemispheres 21.1
2437 Female, age 94, left hemisphere 20.9
1963 Male, age 80, left hemisphere 19.9
Hippocampus, CA3
nTPM: 23.7
2620 Female, age 94, left hemisphere 28.7
2137 Male, age 80, left hemisphere 26.8
2861 Female, age 67, both hemispheres 24.1
1867 Male, age 76, both hemispheres 21.8
2436 Male, age 74, both hemispheres 21.0
1891 Female, age 85, both hemispheres 19.9
Parahippocampal cortex
nTPM: 23.3
2622 Female, age 67, right hemisphere 27.9
2245 Female, age 91, both hemispheres 25.7
2693 Female, age 94, both hemispheres 25.2
1990 Female, age 91, right hemisphere 22.9
2250 Female, age 67, right hemisphere 22.4
1850 Male, age 80, both hemispheres 22.1
2532 Female, age 72, left hemisphere 21.9
2692 Male, age 74, both hemispheres 21.8
1933 Female, age 85, both hemispheres 21.6
2018 Male, age 76, both hemispheres 21.5
Perirhinal gyrus
nTPM: 23.4
1847 Female, age 91, left hemisphere 24.7
1841 Female, age 85, right hemisphere 23.8
1794 Male, age 80, right hemisphere 22.9
2521 Female, age 94, right hemisphere 22.9
2848 Male, age 76, right hemisphere 22.9
Subiculum
nTPM: 21.1
2042 Male, age 76, both hemispheres 21.6
1901 Male, age 80, both hemispheres 21.5
2619 Male, age 74, both hemispheres 21.2
1977 Female, age 85, both hemispheres 20.9
2438 Female, age 94, left hemisphere 20.9
2729 Female, age 91, right hemisphere 20.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.1
Samples: 197

Max nTPM: 36.7
Min nTPM: 0.8
Std nTPM: 7.4
Median nTPM: 14.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 36.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 36.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 33.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 33.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 33.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 30.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 30.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 30.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 29.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 29.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 29.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.5
FF:10153-102I9 76 years, female 19.3
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 10.6
Min nTPM: 6.7
Sample A Female 10.6
Sample B Female 8.7
Sample C Male 8.0
Sample D Male 6.7
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.5
Sample A Female 7.3
Sample B Female 7.2
Sample C Male 8.2
Sample D Male 6.5
Subiculum
nTPM: 7.9
Samples: 4

Max nTPM: 8.6
Min nTPM: 7.2
Sample A Female 8.4
Sample B Female 7.5
Sample C Male 8.6
Sample D Male 7.2
Ventral hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 10.8
Min nTPM: 6.5
Sample A Female 7.5
Sample B Female 6.5
Sample C Male 10.8
Sample D Male 9.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.4
Samples: 4

Max nTPM: 51.1
Min nTPM: 45.1
Sample A Male 45.1
Sample B Male 51.1
Sample C Female 49.0
Sample D Female 48.4
Hippocampal formation
nTPM: 48.5
Samples: 4

Max nTPM: 50.1
Min nTPM: 46.9
Sample A Male 48.7
Sample B Male 46.9
Sample C Female 48.2
Sample D Female 50.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
71211572 Antisense, RP_050816_01_H01, Mouse strain C57BL/6J (56 days, male) 4.0

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The Human Protein Atlas

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