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RPL38
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  • RPL38
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1244.9 nTPM
HPA:655.5 nTPM
GTEx:1244.9 nTPM
FANTOM5:462.1 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA052543
Glandular cells Medium

SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 655.5
overview
Male, age 65
Small intestine sample 232
nTPM: 801.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 653.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 570
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 597.1

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1244.9
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1244.9
Samples: 187

Max nTPM: 2729.0
Min nTPM: 591.3
Std nTPM: 393.1
Median nTPM: 1172.5
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2729.0
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2706.4
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2637.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2406.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2327.4
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2161.6
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2045.7
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2036.6
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2029.4
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2025.0
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1980.1
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1964.8
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1918.6
GTEX-183FY-1626-SM-793D8 20-29 years, male 1900.2
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1855.4
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1829.9
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1794.4
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1780.0
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1777.5
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1758.4
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1715.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1647.7
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1640.6
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1629.2
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1625.0
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1624.9
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1619.3
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1604.7
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1601.3
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1601.3
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1593.5
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1590.9
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1567.6
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1560.4
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1558.1
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1546.3
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1512.6
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1495.4
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1484.2
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1482.1
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1482.1
GTEX-1192X-2526-SM-59868 50-59 years, male 1468.9
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1465.5
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1451.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1440.2
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1440.2
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1432.6
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1428.5
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1425.0
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1416.8
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1377.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1374.8
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1372.9
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1371.1
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1370.4
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1363.8
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1360.2
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1357.9
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1357.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1354.5
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1353.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1349.4
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1338.0
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1334.7
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1330.2
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1327.1
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1322.3
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1317.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1317.5
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1317.2
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1316.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1309.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1304.8
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1299.5
GTEX-1C475-1426-SM-793CH 40-49 years, female 1295.3
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1293.2
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1284.1
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1271.2
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1270.7
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1268.3
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1266.1
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1262.5
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1227.2
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1226.2
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1221.2
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1216.1
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1207.2
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1193.0
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1189.0
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1187.4
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1185.2
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1177.8
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1173.8
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1172.5
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1160.8
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1158.8
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1144.6
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1142.0
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1139.4
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1136.7
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1136.4
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1134.7
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1134.1
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1134.1
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1130.1
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1127.2
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1122.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1110.7
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1107.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1104.4
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1102.5
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1098.0
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1097.6
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1081.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1080.8
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1073.6
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1064.5
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1058.3
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1055.4
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1051.9
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1051.5
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1047.5
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1040.2
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1026.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1022.8
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1015.7
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1012.2
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1006.6
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1006.3
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1005.5
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 993.8
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 991.0
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 989.3
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 985.1
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 979.5
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 977.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 974.8
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 972.6
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 972.1
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 971.2
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 970.2
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 966.8
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 953.2
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 950.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 943.2
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 939.6
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 938.5
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 931.4
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 920.5
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 917.1
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 905.6
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 904.2
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 904.0
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 900.6
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 899.4
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 890.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 889.7
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 881.9
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 873.7
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 873.4
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 860.9
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 860.4
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 849.1
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 842.7
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 831.6
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 817.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 815.5
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 812.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 805.4
GTEX-YFCO-1326-SM-664NV 40-49 years, male 803.8
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 803.5
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 798.8
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 785.6
GTEX-14PN3-2026-SM-68729 60-69 years, female 783.7
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 771.1
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 761.6
GTEX-1122O-1326-SM-5H11F 60-69 years, female 754.0
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 753.3
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 749.9
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 747.1
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 736.7
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 732.9
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 727.6
GTEX-144GM-1026-SM-79OKU 20-29 years, male 726.5
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 715.1
GTEX-ZTSS-0926-SM-59865 40-49 years, male 670.3
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 591.3
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 462.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 462.1
FF:10024-101D6 15,40,85 years, mixed 462.1

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