COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.7 nTPM
HPA:7.4 nTPM
GTEx:22.7 nTPM
FANTOM5:5.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA053883
Endothelial cells Medium
Glandular cells Medium
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPM 7.4
overview
Male, age 54 		Colon sample 67
nTPM: 7.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 2.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 6.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 5.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 11.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 7.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 7.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 8.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 8.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 6.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 10.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 7.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 22.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 22.7
Samples: 373

Max nTPM: 54.6
Min nTPM: 5.5
Std nTPM: 9.6
Median nTPM: 20.5
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 54.6
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 54.3
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 51.2
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 47.9
GTEX-18465-2726-SM-7LT9I 50-59 years, male 47.0
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 46.8
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 46.1
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 45.2
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 43.6
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 43.1
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 42.8
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Colon - Transverse
Average nTPM: 15.5
Samples: 406

Max nTPM: 41.6
Min nTPM: 3.6
Std nTPM: 7.7
Median nTPM: 13.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 41.6
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 40.5
GTEX-11GSP-1626-SM-5986N 60-69 years, female 40.2
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 40.1
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 38.5
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 38.1
GTEX-1LBAC-1626-SM-CXZKV 20-29 years, male 37.1
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 37.0
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 35.8
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 34.5
GTEX-14DAQ-2726-SM-5S2QY 60-69 years, female 33.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 5.3
FF:10014-101C5 62,83,84 years, mixed 5.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.