HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		50.480
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.2 nTPM
HPA:14.2 nTPM
GTEx:13.1 nTPM
FANTOM5:28.6 Scaled Tags Per Million
Pig:22.5 nTPM
Mouse:32.3 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA032146Antibody CAB004580
Glial cells LowLow
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA032145
Hippocampal formation mean intensity 50.480
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 13.285
Molecular layer of the dentate gyrus 13.664
Granular dentate gyrus 50.480
CA1 - oriens layer 41.870
CA1 - pyramidal layer 28.475
CA1 - radiatum layer 16.021
CA2 - oriens layer 20.708
CA2 - pyramidal layer 21.039
CA2 - radiatum layer 15.112
CA3 - oriens layer 20.199
CA3 - pyramidal layer 19.986
CA3 - radiatum layer 17.468
Stratum lucidum 11.742
Lacunosum moleculare 36.895
Subiculum 5.822

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.2
Sample id Sample description nTPM
Hippocampus
nTPM: 14.1
1911 Female, age 85, right hemisphere 14.6
2529 Female, age 94, left hemisphere 14.6
1898 Male, age 80, left hemisphere 14.5
1855 Male, age 76, left hemisphere 14.3
2148 Female, age 91, left hemisphere 13.5
2621 Female, age 67, right hemisphere 13.2
Dentate gyrus
nTPM: 14.2
2010 Male, age 76, both hemispheres 15.3
2528 Male, age 74, both hemispheres 14.3
2246 Female, age 85, both hemispheres 14.1
2531 Female, age 67, both hemispheres 14.0
1927 Female, age 91, both hemispheres 13.6
2530 Female, age 94, left hemisphere 13.6
Entorhinal gyrus
nTPM: 13.5
1938 Female, age 85, left hemisphere 15.1
2117 Female, age 91, right hemisphere 14.9
2764 Male, age 80, right hemisphere 13.0
1787 Male, age 76, left hemisphere 12.9
2686 Male, age 75, right hemisphere 12.8
2613 Female, age 94, left hemisphere 12.6
Hippocampus, CA1
nTPM: 13.5
1873 Female, age 85, both hemispheres 14.1
2527 Male, age 74, both hemispheres 13.8
2045 Male, age 76, both hemispheres 13.5
2082 Female, age 91, right hemisphere 13.5
2749 Male, age 80, left hemisphere 12.8
Hippocampus, CA2
nTPM: 13.7
2249 Male, age 74, both hemispheres 14.2
1940 Female, age 85, left hemisphere 14.0
1963 Male, age 80, left hemisphere 13.8
2113 Female, age 91, right hemisphere 13.8
2437 Female, age 94, left hemisphere 13.6
1892 Male, age 76, both hemispheres 12.9
Hippocampus, CA3
nTPM: 13.8
1891 Female, age 85, both hemispheres 14.9
2436 Male, age 74, both hemispheres 13.9
2620 Female, age 94, left hemisphere 13.9
1867 Male, age 76, both hemispheres 13.6
2137 Male, age 80, left hemisphere 13.3
2861 Female, age 67, both hemispheres 13.0
Parahippocampal cortex
nTPM: 13.6
1850 Male, age 80, both hemispheres 14.6
2018 Male, age 76, both hemispheres 14.3
1933 Female, age 85, both hemispheres 14.0
2250 Female, age 67, right hemisphere 14.0
1990 Female, age 91, right hemisphere 13.7
2693 Female, age 94, both hemispheres 13.4
2692 Male, age 74, both hemispheres 13.3
2245 Female, age 91, both hemispheres 13.2
2532 Female, age 72, left hemisphere 13.2
2622 Female, age 67, right hemisphere 12.4
Perirhinal gyrus
nTPM: 13.9
1841 Female, age 85, right hemisphere 15.0
1794 Male, age 80, right hemisphere 13.9
2521 Female, age 94, right hemisphere 13.8
2848 Male, age 76, right hemisphere 13.4
1847 Female, age 91, left hemisphere 13.2
Subiculum
nTPM: 14.1
2042 Male, age 76, both hemispheres 14.9
2729 Female, age 91, right hemisphere 14.7
1977 Female, age 85, both hemispheres 14.2
2438 Female, age 94, left hemisphere 14.2
1901 Male, age 80, both hemispheres 14.1
2619 Male, age 74, both hemispheres 12.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.1
Samples: 197

Max nTPM: 20.8
Min nTPM: 8.0
Std nTPM: 2.6
Median nTPM: 12.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 20.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 20.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 20.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 20.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 19.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 19.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 18.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 18.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 17.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 17.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 17.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.6
FF:10153-102I9 76 years, female 32.1
FF:10169-103B7 60 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 25.4
Min nTPM: 20.2
Sample A Female 25.4
Sample B Female 21.8
Sample C Male 22.7
Sample D Male 20.2
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 22.1
Min nTPM: 16.1
Sample A Female 19.7
Sample B Female 22.1
Sample C Male 21.7
Sample D Male 16.1
Subiculum
nTPM: 20.6
Samples: 4

Max nTPM: 24.6
Min nTPM: 18.5
Sample A Female 24.6
Sample B Female 18.5
Sample C Male 19.0
Sample D Male 20.4
Ventral hippocampus
nTPM: 19.7
Samples: 4

Max nTPM: 21.9
Min nTPM: 17.4
Sample A Female 21.9
Sample B Female 19.1
Sample C Male 17.4
Sample D Male 20.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 29.5
Min nTPM: 28.2
Sample A Male 29.4
Sample B Male 28.2
Sample C Female 29.4
Sample D Female 29.5
Hippocampal formation
nTPM: 32.3
Samples: 4

Max nTPM: 36.9
Min nTPM: 27.7
Sample A Male 31.7
Sample B Male 36.9
Sample C Female 32.8
Sample D Female 27.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
74822606 Antisense, RP_060321_02_H06, Mouse strain C57BL/6J (56 days, male) 3.1
79556710 Antisense, RP_071204_01_D10, Mouse strain C57BL/6J (56 days, male) 2.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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