COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:34.3 nTPM
HPA:34.3 nTPM
GTEx:20.1 nTPM
FANTOM5:59.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA032146Antibody CAB004580
Endothelial cells MediumMedium
Glandular cells HighMedium
Peripheral nerve/ganglion Medium-





COLON - HPA RNA-seqi
Average nTPM 34.3
overview
Male, age 54 		Colon sample 67
nTPM: 28.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 30.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 27.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 28.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 28.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 29.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 41.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 42.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 33.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 46
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 43
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 38.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 27.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 20.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 19.9
Samples: 373

Max nTPM: 30.6
Min nTPM: 8.0
Std nTPM: 3.4
Median nTPM: 20.2
GTEX-14E1K-1626-SM-664MO 50-59 years, male 30.6
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 29.0
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 28.8
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 28.5
GTEX-16Z82-2426-SM-7KUMS 60-69 years, male 27.3
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 27.0
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 26.9
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 26.3
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 26.2
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 26.2
GTEX-1HCU7-2726-SM-A9G3D 50-59 years, male 26.2
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Colon - Transverse
Average nTPM: 20.1
Samples: 406

Max nTPM: 32.7
Min nTPM: 9.1
Std nTPM: 3.7
Median nTPM: 19.7
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 32.7
GTEX-1PWST-2426-SM-EWRMP 70-79 years, male 32.1
GTEX-1H11D-2626-SM-9JGH4 40-49 years, male 29.6
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 29.4
GTEX-144GL-2526-SM-5TDDL 50-59 years, male 29.4
GTEX-15DYW-2326-SM-6PAMU 60-69 years, female 29.3
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 28.7
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 28.3
GTEX-R45C-2126-SM-EZ6KZ 60-69 years, female 28.1
GTEX-1AYD5-1726-SM-7RHFW 50-59 years, male 28.0
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 27.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 59.3
FF:10014-101C5 62,83,84 years, mixed 59.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.