HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:89.8 nTPM
HPA:89.8 nTPM
GTEx:67.4 nTPM
FANTOM5:47.4 Scaled Tags Per Million
Pig:40.3 nTPM
Mouse:50.4 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050716
Glial cells Not detected
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 89.8
Sample id Sample description nTPM
Hippocampus
nTPM: 87.6
1855 Male, age 76, left hemisphere 92.2
2529 Female, age 94, left hemisphere 91.3
1898 Male, age 80, left hemisphere 89.2
2621 Female, age 67, right hemisphere 86.9
1911 Female, age 85, right hemisphere 85.2
2148 Female, age 91, left hemisphere 80.6
Dentate gyrus
nTPM: 87.9
2530 Female, age 94, left hemisphere 106.2
2531 Female, age 67, both hemispheres 87.5
2010 Male, age 76, both hemispheres 86.3
1927 Female, age 91, both hemispheres 84.9
2528 Male, age 74, both hemispheres 82.0
2246 Female, age 85, both hemispheres 80.3
Entorhinal gyrus
nTPM: 89.8
2686 Male, age 75, right hemisphere 99.1
2613 Female, age 94, left hemisphere 93.0
1787 Male, age 76, left hemisphere 92.9
2764 Male, age 80, right hemisphere 91.4
1938 Female, age 85, left hemisphere 84.7
2117 Female, age 91, right hemisphere 78.0
Hippocampus, CA1
nTPM: 83.0
2749 Male, age 80, left hemisphere 84.5
2527 Male, age 74, both hemispheres 84.1
2082 Female, age 91, right hemisphere 83.7
1873 Female, age 85, both hemispheres 81.7
2045 Male, age 76, both hemispheres 81.1
Hippocampus, CA2
nTPM: 88.7
2437 Female, age 94, left hemisphere 98.9
1892 Male, age 76, both hemispheres 92.5
1963 Male, age 80, left hemisphere 87.2
1940 Female, age 85, left hemisphere 86.7
2113 Female, age 91, right hemisphere 84.7
2249 Male, age 74, both hemispheres 82.2
Hippocampus, CA3
nTPM: 89.6
2861 Female, age 67, both hemispheres 109.1
1867 Male, age 76, both hemispheres 97.6
2137 Male, age 80, left hemisphere 87.4
2620 Female, age 94, left hemisphere 84.7
1891 Female, age 85, both hemispheres 82.3
2436 Male, age 74, both hemispheres 76.7
Parahippocampal cortex
nTPM: 88.6
2622 Female, age 67, right hemisphere 98.9
2532 Female, age 72, left hemisphere 94.0
2018 Male, age 76, both hemispheres 90.2
2692 Male, age 74, both hemispheres 89.0
1990 Female, age 91, right hemisphere 88.9
1850 Male, age 80, both hemispheres 87.5
1933 Female, age 85, both hemispheres 86.7
2693 Female, age 94, both hemispheres 85.3
2245 Female, age 91, both hemispheres 84.9
2250 Female, age 67, right hemisphere 80.2
Perirhinal gyrus
nTPM: 87.8
1794 Male, age 80, right hemisphere 91.4
1841 Female, age 85, right hemisphere 91.4
1847 Female, age 91, left hemisphere 88.1
2848 Male, age 76, right hemisphere 85.2
2521 Female, age 94, right hemisphere 82.9
Subiculum
nTPM: 86.9
2438 Female, age 94, left hemisphere 92.8
2619 Male, age 74, both hemispheres 90.6
2042 Male, age 76, both hemispheres 86.9
1901 Male, age 80, both hemispheres 85.9
1977 Female, age 85, both hemispheres 83.9
2729 Female, age 91, right hemisphere 81.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.4
Samples: 197

Max nTPM: 194.1
Min nTPM: 15.0
Std nTPM: 29.7
Median nTPM: 60.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 194.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 161.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 160.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 160.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 158.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 153.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 142.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 137.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 137.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 134.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 131.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.4
FF:10153-102I9 76 years, female 76.0
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.8
Samples: 4

Max nTPM: 46.7
Min nTPM: 22.7
Sample A Female 43.7
Sample B Female 30.0
Sample C Male 46.7
Sample D Male 22.7
Entorhinal cortex
nTPM: 40.3
Samples: 4

Max nTPM: 46.4
Min nTPM: 36.0
Sample A Female 38.4
Sample B Female 40.5
Sample C Male 46.4
Sample D Male 36.0
Subiculum
nTPM: 33.0
Samples: 4

Max nTPM: 47.5
Min nTPM: 25.2
Sample A Female 47.5
Sample B Female 25.2
Sample C Male 29.8
Sample D Male 29.3
Ventral hippocampus
nTPM: 32.3
Samples: 4

Max nTPM: 41.9
Min nTPM: 23.8
Sample A Female 32.7
Sample B Female 23.8
Sample C Male 41.9
Sample D Male 30.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.4
Samples: 4

Max nTPM: 54.7
Min nTPM: 46.8
Sample A Male 46.8
Sample B Male 50.4
Sample C Female 54.7
Sample D Female 49.6
Hippocampal formation
nTPM: 45.8
Samples: 4

Max nTPM: 50.9
Min nTPM: 40.6
Sample A Male 48.8
Sample B Male 40.6
Sample C Female 43.0
Sample D Female 50.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
532705 Antisense, RP_040825_01_F04, Mouse strain C57BL/6J (56 days, male) 2.1

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