COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:54.3 nTPM
HPA:37.1 nTPM
GTEx:54.3 nTPM
FANTOM5:47.4 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody CAB005021Antibody CAB037248
Endothelial cells Not detected-
Glandular cells LowMedium
Peripheral nerve/ganglion Not detected-





COLON - HPA RNA-seqi
Average nTPM 37.1
overview
Male, age 54 		Colon sample 67
nTPM: 49.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 33.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 45.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 29.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 29.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 29
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 33.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 38.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 35
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 47.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 39.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 34.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 37.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 54.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 38.5
Samples: 373

Max nTPM: 79.7
Min nTPM: 24.0
Std nTPM: 8.5
Median nTPM: 37.1
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 79.7
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 78.7
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 77.9
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 71.9
GTEX-WYJK-2326-SM-4ONDN 50-59 years, male 71.5
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 70.9
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 68.2
GTEX-1OJC3-1826-SM-DTX93 20-29 years, male 65.8
GTEX-WH7G-1426-SM-4LVMU 40-49 years, male 64.8
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 61.7
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 60.8
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Colon - Transverse
Average nTPM: 54.3
Samples: 406

Max nTPM: 140.1
Min nTPM: 21.6
Std nTPM: 17.7
Median nTPM: 52.0
GTEX-14JIY-3326-SM-6871E 60-69 years, male 140.1
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 103.2
GTEX-1JMPY-0426-SM-C1YQ3 30-39 years, male 100.7
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 100.3
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 99.1
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 98.2
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 97.5
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 92.0
GTEX-1I4MK-1126-SM-B2LWS 50-59 years, female 91.9
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 91.6
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 89.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 47.4
FF:10014-101C5 62,83,84 years, mixed 47.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.