HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:47.3 nTPM
HPA:47.3 nTPM
GTEx:53.1 nTPM
FANTOM5:27.6 Scaled Tags Per Million
Pig:18.4 nTPM
Mouse:60.7 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046431Antibody CAB008634Antibody CAB069419
Glial cells Not detectedHighNot detected
Neuronal cells Not detectedMediumLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.3
Sample id Sample description nTPM
Hippocampus
nTPM: 40.2
1898 Male, age 80, left hemisphere 45.6
2621 Female, age 67, right hemisphere 43.7
1855 Male, age 76, left hemisphere 43.1
2148 Female, age 91, left hemisphere 41.5
1911 Female, age 85, right hemisphere 35.6
2529 Female, age 94, left hemisphere 31.5
Dentate gyrus
nTPM: 41.8
1927 Female, age 91, both hemispheres 54.8
2010 Male, age 76, both hemispheres 53.5
2246 Female, age 85, both hemispheres 38.1
2528 Male, age 74, both hemispheres 36.0
2531 Female, age 67, both hemispheres 34.6
2530 Female, age 94, left hemisphere 33.6
Entorhinal gyrus
nTPM: 32.8
2613 Female, age 94, left hemisphere 35.3
1938 Female, age 85, left hemisphere 33.8
2764 Male, age 80, right hemisphere 32.6
2686 Male, age 75, right hemisphere 32.5
2117 Female, age 91, right hemisphere 31.5
1787 Male, age 76, left hemisphere 31.2
Hippocampus, CA1
nTPM: 47.3
2749 Male, age 80, left hemisphere 65.8
1873 Female, age 85, both hemispheres 55.8
2045 Male, age 76, both hemispheres 46.3
2527 Male, age 74, both hemispheres 36.2
2082 Female, age 91, right hemisphere 32.4
Hippocampus, CA2
nTPM: 37.7
1963 Male, age 80, left hemisphere 54.1
1892 Male, age 76, both hemispheres 41.7
2249 Male, age 74, both hemispheres 33.9
2113 Female, age 91, right hemisphere 33.8
2437 Female, age 94, left hemisphere 31.9
1940 Female, age 85, left hemisphere 30.8
Hippocampus, CA3
nTPM: 39.1
2620 Female, age 94, left hemisphere 47.0
2137 Male, age 80, left hemisphere 44.4
1867 Male, age 76, both hemispheres 40.2
1891 Female, age 85, both hemispheres 34.5
2861 Female, age 67, both hemispheres 34.3
2436 Male, age 74, both hemispheres 34.0
Parahippocampal cortex
nTPM: 34.9
2018 Male, age 76, both hemispheres 40.5
1850 Male, age 80, both hemispheres 36.4
2693 Female, age 94, both hemispheres 36.0
2245 Female, age 91, both hemispheres 35.4
2692 Male, age 74, both hemispheres 34.7
2250 Female, age 67, right hemisphere 34.2
1933 Female, age 85, both hemispheres 34.1
1990 Female, age 91, right hemisphere 33.5
2532 Female, age 72, left hemisphere 32.8
2622 Female, age 67, right hemisphere 31.5
Perirhinal gyrus
nTPM: 34.2
1794 Male, age 80, right hemisphere 37.0
1847 Female, age 91, left hemisphere 36.1
1841 Female, age 85, right hemisphere 35.3
2521 Female, age 94, right hemisphere 32.9
2848 Male, age 76, right hemisphere 30.0
Subiculum
nTPM: 33.4
2042 Male, age 76, both hemispheres 37.3
2729 Female, age 91, right hemisphere 36.2
1901 Male, age 80, both hemispheres 35.4
2619 Male, age 74, both hemispheres 31.5
1977 Female, age 85, both hemispheres 31.1
2438 Female, age 94, left hemisphere 28.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.1
Samples: 197

Max nTPM: 335.3
Min nTPM: 8.0
Std nTPM: 48.1
Median nTPM: 36.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 335.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 249.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 184.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 180.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 179.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 179.4
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 162.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 161.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 159.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 158.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 157.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.6
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 11.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 14.1
Min nTPM: 10.3
Sample A Female 14.1
Sample B Female 13.2
Sample C Male 10.9
Sample D Male 10.3
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 21.5
Min nTPM: 15.4
Sample A Female 19.5
Sample B Female 21.5
Sample C Male 15.4
Sample D Male 17.4
Subiculum
nTPM: 13.2
Samples: 4

Max nTPM: 17.2
Min nTPM: 10.2
Sample A Female 17.2
Sample B Female 12.3
Sample C Male 10.2
Sample D Male 13.2
Ventral hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.6
Sample A Female 12.1
Sample B Female 9.6
Sample C Male 12.3
Sample D Male 10.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.8
Samples: 4

Max nTPM: 64.0
Min nTPM: 57.1
Sample A Male 59.1
Sample B Male 62.8
Sample C Female 57.1
Sample D Female 64.0
Hippocampal formation
nTPM: 58.9
Samples: 4

Max nTPM: 62.4
Min nTPM: 52.8
Sample A Male 60.7
Sample B Male 59.8
Sample C Female 62.4
Sample D Female 52.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
70545937 Antisense, RP_050623_03_C05, Mouse strain C57BL/6J (56 days, male) 1.1
73931409 Antisense, RP_051214_04_E01, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

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