COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:151.5 nTPM
HPA:9.6 nTPM
GTEx:151.5 nTPM
FANTOM5:98.0 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 9.6
overview
Male, age 54 		Colon sample 67
nTPM: 10.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 9.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 7.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 15
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 10.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 11.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 3.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 8.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 8.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 6.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 14.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 12.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 151.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 151.5
Samples: 373

Max nTPM: 533.0
Min nTPM: 29.4
Std nTPM: 57.8
Median nTPM: 143.2
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 533.0
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 293.7
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 287.6
GTEX-1R9PO-2026-SM-E9J4N 60-69 years, female 285.9
GTEX-17JCI-2826-SM-7IGNA 60-69 years, female 281.4
GTEX-14BIN-2426-SM-5TDCF 50-59 years, female 276.9
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 276.6
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 275.4
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 268.4
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 266.3
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 261.7
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Colon - Transverse
Average nTPM: 80.8
Samples: 406

Max nTPM: 236.3
Min nTPM: 14.5
Std nTPM: 45.6
Median nTPM: 73.3
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 236.3
GTEX-14E1K-1826-SM-793DT 50-59 years, male 222.5
GTEX-11GSP-1626-SM-5986N 60-69 years, female 222.1
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 218.0
GTEX-14PJ3-0926-SM-69LQG 50-59 years, male 208.7
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 208.3
GTEX-17F96-2026-SM-79ON4 70-79 years, male 208.0
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 190.7
GTEX-OXRN-2026-SM-E6CHK 50-59 years, male 187.6
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 176.2
GTEX-1R9K5-2126-SM-E8VN1 50-59 years, male 174.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 98.0
FF:10014-101C5 62,83,84 years, mixed 98.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.