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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:270.8 nTPM
FANTOM5:301.1 Scaled Tags Per Million
Pig:177.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA042574
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 270.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 270.8
Samples: 246

Max nTPM: 756.8
Min nTPM: 122.7
Std nTPM: 97.5
Median nTPM: 254.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 756.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 733.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 713.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 620.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 579.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 549.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 526.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 479.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 469.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 462.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 461.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 447.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 445.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 441.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 436.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 431.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 421.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 421.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 413.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 410.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 403.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 400.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 381.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 379.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 376.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 376.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 375.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 372.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 367.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 366.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 365.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 363.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 360.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 356.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 355.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 350.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 349.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 347.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 346.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 345.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 341.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 338.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 337.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 334.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 333.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 329.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 324.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 324.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 320.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 320.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 319.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 317.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 315.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 314.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 312.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 311.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 310.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 309.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 308.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 307.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 307.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 306.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 305.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 305.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 304.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 303.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 302.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 302.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 299.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 298.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 298.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 296.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 295.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 293.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 292.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 292.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 291.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 289.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 288.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 287.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 286.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 285.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 285.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 285.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 284.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 284.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 283.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 282.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 279.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 278.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 278.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 277.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 276.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 276.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 276.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 274.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 272.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 272.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 272.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 270.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 270.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 268.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 268.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 267.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 267.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 265.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 264.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 264.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 263.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 262.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 262.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 262.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 260.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 259.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 258.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 258.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 257.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 257.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 257.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 256.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 255.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 255.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 254.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 254.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 254.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 252.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 252.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 252.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 251.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 251.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 250.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 250.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 249.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 248.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 247.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 246.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 245.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 245.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 245.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 244.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 243.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 242.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 241.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 241.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 240.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 240.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 238.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 236.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 235.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 234.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 234.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 234.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 233.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 233.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 231.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 230.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 229.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 229.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 229.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 228.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 228.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 227.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 227.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 226.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 226.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 225.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 223.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 220.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 220.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 217.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 216.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 214.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 213.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 211.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 211.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 210.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 209.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 209.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 208.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 208.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 208.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 207.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 207.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 204.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 203.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 203.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 202.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 200.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 199.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 198.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 198.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 198.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 197.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 197.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 197.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 196.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 196.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 195.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 194.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 194.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 190.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 190.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 189.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 188.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 188.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 185.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 184.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 183.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 182.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 182.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 182.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 180.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 179.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 178.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 178.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 177.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 174.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 174.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 174.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 174.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 174.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 173.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 173.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 173.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 172.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 171.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 168.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 166.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 166.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 164.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 163.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 161.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 159.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 158.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 155.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 153.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 152.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 152.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 152.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 151.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 150.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 148.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 142.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 141.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 139.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 122.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 301.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 301.2
FF:10164-103B2 76 years, female 301.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 177.6
Pig sample Sample description nTPM
Caudate
nTPM: 177.6
Samples: 4

Max nTPM: 206.6
Min nTPM: 155.7
Sample A Female 166.9
Sample B Female 181.2
Sample C Male 206.6
Sample D Male 155.7

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