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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:278.1 nTPM
FANTOM5:273.0 Scaled Tags Per Million
Pig:117.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA023266Antibody HPA023278Antibody HPA023280Antibody HPA023338Antibody CAB002672
Glial cells HighMediumMediumMediumHigh
Neuronal cells Not detectedNot detectedNot detectedNot detectedNot detected







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 278.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 278.1
Samples: 246

Max nTPM: 1082.8
Min nTPM: 63.0
Std nTPM: 137.2
Median nTPM: 247.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1082.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 960.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 620.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 616.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 615.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 590.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 577.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 559.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 556.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 551.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 547.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 541.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 528.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 524.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 520.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 514.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 512.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 511.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 506.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 503.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 496.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 477.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 474.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 462.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 454.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 453.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 447.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 446.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 445.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 443.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 443.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 435.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 434.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 423.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 421.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 417.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 410.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 408.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 407.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 400.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 399.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 399.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 390.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 386.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 380.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 380.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 379.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 379.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 379.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 376.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 365.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 359.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 357.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 349.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 348.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 344.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 343.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 342.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 342.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 341.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 338.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 335.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 335.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 334.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 330.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 329.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 328.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 326.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 325.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 323.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 322.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 320.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 320.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 318.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 317.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 316.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 313.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 309.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 308.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 305.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 305.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 304.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 304.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 303.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 301.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 301.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 300.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 300.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 299.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 299.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 295.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 294.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 294.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 291.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 290.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 285.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 283.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 279.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 279.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 277.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 277.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 274.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 271.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 268.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 268.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 265.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 264.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 264.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 264.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 263.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 262.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 262.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 260.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 259.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 256.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 256.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 255.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 254.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 250.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 249.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 249.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 249.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 247.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 247.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 247.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 246.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 239.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 239.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 238.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 237.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 236.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 235.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 232.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 231.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 230.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 227.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 226.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 226.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 226.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 225.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 225.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 221.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 220.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 218.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 218.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 217.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 217.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 217.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 217.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 216.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 215.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 215.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 214.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 212.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 211.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 210.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 205.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 204.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 204.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 201.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 199.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 199.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 199.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 198.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 198.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 197.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 197.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 197.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 196.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 196.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 195.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 194.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 192.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 191.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 191.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 191.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 191.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 190.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 190.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 185.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 185.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 185.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 184.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 183.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 182.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 176.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 174.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 174.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 174.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 173.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 172.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 171.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 170.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 168.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 167.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 167.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 166.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 165.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 165.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 162.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 161.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 161.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 160.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 158.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 157.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 157.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 156.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 156.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 155.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 155.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 154.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 154.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 153.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 152.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 150.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 148.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 148.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 147.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 147.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 146.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 146.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 145.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 143.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 142.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 140.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 140.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 139.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 136.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 135.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 135.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 134.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 131.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 131.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 130.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 125.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 124.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 121.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 119.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 119.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 116.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 113.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 111.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 104.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 95.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 94.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 63.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 273.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 273.0
FF:10164-103B2 76 years, female 273.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 117.1
Pig sample Sample description nTPM
Caudate
nTPM: 117.1
Samples: 4

Max nTPM: 122.1
Min nTPM: 114.7
Sample A Female 122.1
Sample B Female 114.7
Sample C Male 114.9
Sample D Male 116.8

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