HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:217.2 nTPM
HPA:217.2 nTPM
GTEx:249.0 nTPM
FANTOM5:903.1 Scaled Tags Per Million
Pig:228.1 nTPM
Mouse:428.9 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 217.2
Sample id Sample description nTPM
Hippocampus
nTPM: 206.1
2621 Female, age 67, right hemisphere 232.7
1855 Male, age 76, left hemisphere 209.8
1898 Male, age 80, left hemisphere 203.2
2148 Female, age 91, left hemisphere 201.5
2529 Female, age 94, left hemisphere 198.1
1911 Female, age 85, right hemisphere 191.5
Dentate gyrus
nTPM: 200.5
2010 Male, age 76, both hemispheres 222.2
2530 Female, age 94, left hemisphere 218.8
2246 Female, age 85, both hemispheres 206.0
1927 Female, age 91, both hemispheres 187.6
2528 Male, age 74, both hemispheres 184.9
2531 Female, age 67, both hemispheres 183.8
Entorhinal gyrus
nTPM: 210.5
2117 Female, age 91, right hemisphere 227.8
1787 Male, age 76, left hemisphere 217.0
2686 Male, age 75, right hemisphere 211.7
1938 Female, age 85, left hemisphere 206.1
2764 Male, age 80, right hemisphere 202.8
2613 Female, age 94, left hemisphere 197.7
Hippocampus, CA1
nTPM: 205.2
2749 Male, age 80, left hemisphere 221.5
1873 Female, age 85, both hemispheres 208.4
2527 Male, age 74, both hemispheres 206.0
2045 Male, age 76, both hemispheres 203.3
2082 Female, age 91, right hemisphere 186.8
Hippocampus, CA2
nTPM: 194.6
1892 Male, age 76, both hemispheres 211.8
2249 Male, age 74, both hemispheres 200.6
2113 Female, age 91, right hemisphere 195.6
1940 Female, age 85, left hemisphere 194.4
1963 Male, age 80, left hemisphere 184.7
2437 Female, age 94, left hemisphere 180.5
Hippocampus, CA3
nTPM: 201.5
1867 Male, age 76, both hemispheres 222.1
1891 Female, age 85, both hemispheres 206.8
2137 Male, age 80, left hemisphere 202.3
2620 Female, age 94, left hemisphere 201.7
2861 Female, age 67, both hemispheres 190.2
2436 Male, age 74, both hemispheres 185.9
Parahippocampal cortex
nTPM: 210.0
2018 Male, age 76, both hemispheres 235.5
2532 Female, age 72, left hemisphere 232.3
2250 Female, age 67, right hemisphere 216.4
1850 Male, age 80, both hemispheres 216.0
2245 Female, age 91, both hemispheres 213.4
1990 Female, age 91, right hemisphere 205.0
2622 Female, age 67, right hemisphere 202.6
1933 Female, age 85, both hemispheres 202.4
2692 Male, age 74, both hemispheres 194.0
2693 Female, age 94, both hemispheres 181.9
Perirhinal gyrus
nTPM: 208.3
2848 Male, age 76, right hemisphere 219.7
1841 Female, age 85, right hemisphere 217.6
1794 Male, age 80, right hemisphere 214.8
1847 Female, age 91, left hemisphere 197.5
2521 Female, age 94, right hemisphere 192.0
Subiculum
nTPM: 217.2
2042 Male, age 76, both hemispheres 278.1
1901 Male, age 80, both hemispheres 219.7
1977 Female, age 85, both hemispheres 218.0
2619 Male, age 74, both hemispheres 216.7
2729 Female, age 91, right hemisphere 187.3
2438 Female, age 94, left hemisphere 183.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 249.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 249.0
Samples: 197

Max nTPM: 559.0
Min nTPM: 104.9
Std nTPM: 65.5
Median nTPM: 237.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 559.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 494.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 485.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 446.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 428.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 401.7
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 383.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 374.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 365.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 365.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 363.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 903.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 903.1
FF:10169-103B7 60 years, female 918.7
FF:10153-102I9 76 years, female 887.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 228.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 228.1
Samples: 4

Max nTPM: 305.0
Min nTPM: 161.1
Sample A Female 305.0
Sample B Female 203.3
Sample C Male 242.9
Sample D Male 161.1
Entorhinal cortex
nTPM: 192.7
Samples: 4

Max nTPM: 223.9
Min nTPM: 155.6
Sample A Female 201.7
Sample B Female 223.9
Sample C Male 189.7
Sample D Male 155.6
Subiculum
nTPM: 194.6
Samples: 4

Max nTPM: 264.4
Min nTPM: 165.9
Sample A Female 264.4
Sample B Female 177.0
Sample C Male 165.9
Sample D Male 171.0
Ventral hippocampus
nTPM: 206.4
Samples: 4

Max nTPM: 252.8
Min nTPM: 149.4
Sample A Female 213.5
Sample B Female 149.4
Sample C Male 252.8
Sample D Male 210.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 428.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 392.0
Samples: 4

Max nTPM: 401.4
Min nTPM: 375.8
Sample A Male 391.6
Sample B Male 399.0
Sample C Female 401.4
Sample D Female 375.8
Hippocampal formation
nTPM: 428.9
Samples: 4

Max nTPM: 469.3
Min nTPM: 412.5
Sample A Male 469.3
Sample B Male 413.4
Sample C Female 420.5
Sample D Female 412.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
67978400 Antisense, RP_040923_01_B01, Mouse strain C57BL/6J (56 days, male) 12.8
77791992 Antisense, RP_070208_04_C07, Mouse strain C57BL/6J (56 days, male) 10.5

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