HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:11.0 nTPM
HPA:11.0 nTPM
GTEx:10.5 nTPM
FANTOM5:10.9 Scaled Tags Per Million
Pig:3.4 nTPM
Mouse:12.5 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.0
Sample id Sample description nTPM
Hippocampus
nTPM: 8.3
2529 Female, age 94, left hemisphere 10.3
1911 Female, age 85, right hemisphere 8.6
2621 Female, age 67, right hemisphere 8.6
2148 Female, age 91, left hemisphere 7.9
1855 Male, age 76, left hemisphere 7.4
1898 Male, age 80, left hemisphere 7.2
Dentate gyrus
nTPM: 9.3
2531 Female, age 67, both hemispheres 10.9
2530 Female, age 94, left hemisphere 10.6
2246 Female, age 85, both hemispheres 9.8
1927 Female, age 91, both hemispheres 9.5
2528 Male, age 74, both hemispheres 7.9
2010 Male, age 76, both hemispheres 6.9
Entorhinal gyrus
nTPM: 11.0
2686 Male, age 75, right hemisphere 15.3
2613 Female, age 94, left hemisphere 12.6
1787 Male, age 76, left hemisphere 11.0
2764 Male, age 80, right hemisphere 10.9
2117 Female, age 91, right hemisphere 8.7
1938 Female, age 85, left hemisphere 7.5
Hippocampus, CA1
nTPM: 9.1
2082 Female, age 91, right hemisphere 10.2
2527 Male, age 74, both hemispheres 10.1
1873 Female, age 85, both hemispheres 8.5
2749 Male, age 80, left hemisphere 8.4
2045 Male, age 76, both hemispheres 8.3
Hippocampus, CA2
nTPM: 8.5
2437 Female, age 94, left hemisphere 10.1
1940 Female, age 85, left hemisphere 9.5
1892 Male, age 76, both hemispheres 9.4
2113 Female, age 91, right hemisphere 7.7
2249 Male, age 74, both hemispheres 7.4
1963 Male, age 80, left hemisphere 6.7
Hippocampus, CA3
nTPM: 10.2
2620 Female, age 94, left hemisphere 14.9
2861 Female, age 67, both hemispheres 11.4
1891 Female, age 85, both hemispheres 9.4
2436 Male, age 74, both hemispheres 9.4
1867 Male, age 76, both hemispheres 8.3
2137 Male, age 80, left hemisphere 7.9
Parahippocampal cortex
nTPM: 10.1
2622 Female, age 67, right hemisphere 13.9
2693 Female, age 94, both hemispheres 12.5
2692 Male, age 74, both hemispheres 11.3
2532 Female, age 72, left hemisphere 10.4
1990 Female, age 91, right hemisphere 9.6
2245 Female, age 91, both hemispheres 9.3
1850 Male, age 80, both hemispheres 9.2
2250 Female, age 67, right hemisphere 9.2
1933 Female, age 85, both hemispheres 8.2
2018 Male, age 76, both hemispheres 7.7
Perirhinal gyrus
nTPM: 9.7
1794 Male, age 80, right hemisphere 10.9
2848 Male, age 76, right hemisphere 10.6
2521 Female, age 94, right hemisphere 9.8
1847 Female, age 91, left hemisphere 9.1
1841 Female, age 85, right hemisphere 8.3
Subiculum
nTPM: 8.5
2619 Male, age 74, both hemispheres 11.0
1901 Male, age 80, both hemispheres 9.2
2729 Female, age 91, right hemisphere 8.8
1977 Female, age 85, both hemispheres 8.6
2042 Male, age 76, both hemispheres 7.0
2438 Female, age 94, left hemisphere 6.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.5
Samples: 197

Max nTPM: 18.7
Min nTPM: 5.6
Std nTPM: 2.2
Median nTPM: 10.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 18.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 16.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 16.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 16.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 15.8
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 15.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 15.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 15.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 14.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 14.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 14.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.9
FF:10169-103B7 60 years, female 12.5
FF:10153-102I9 76 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.3
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.9
Sample A Female 3.4
Sample B Female 3.2
Sample C Male 3.7
Sample D Male 2.9
Entorhinal cortex
nTPM: 2.9
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.5
Sample A Female 3.3
Sample B Female 3.0
Sample C Male 2.8
Sample D Male 2.5
Subiculum
nTPM: 3.3
Samples: 4

Max nTPM: 3.8
Min nTPM: 3.0
Sample A Female 3.8
Sample B Female 3.0
Sample C Male 3.2
Sample D Male 3.1
Ventral hippocampus
nTPM: 3.4
Samples: 4

Max nTPM: 4.5
Min nTPM: 2.7
Sample A Female 3.0
Sample B Female 2.7
Sample C Male 4.5
Sample D Male 3.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 13.3
Min nTPM: 12.0
Sample A Male 13.3
Sample B Male 12.0
Sample C Female 12.3
Sample D Female 12.4
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 14.5
Min nTPM: 10.8
Sample A Male 14.5
Sample B Male 11.9
Sample C Female 11.8
Sample D Female 10.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
68843859 Antisense, RP_050217_02_D09, Mouse strain C57BL/6J (56 days, male) 1.2

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