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SPTBN2
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:40.0 nTPM
FANTOM5:139.4 Scaled Tags Per Million
Pig:47.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA039293Antibody HPA043529Antibody CAB009844
Glial cells Not detectedLowNot detected
Neuronal cells HighMediumMedium







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 40.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 40.0
Samples: 246

Max nTPM: 105.9
Min nTPM: 7.5
Std nTPM: 17.2
Median nTPM: 38.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 105.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 86.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 82.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 81.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 81.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 79.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 78.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 74.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 73.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 72.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 72.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 71.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 70.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 69.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 68.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 67.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 67.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 67.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 67.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 67.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 66.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 66.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 64.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 63.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 62.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 62.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 62.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 61.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 61.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 61.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 60.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 60.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 59.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 59.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 58.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 58.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 58.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 58.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 57.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 57.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 56.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 55.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 55.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 54.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 54.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 54.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 54.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 54.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 53.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 53.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 53.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 53.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 53.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 53.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 52.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 52.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 52.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 52.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 51.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 51.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 51.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 51.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 50.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 49.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 49.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 49.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 49.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 49.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 49.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 49.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 48.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 48.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 48.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 48.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 48.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 47.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 47.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 47.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 47.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 46.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 46.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 46.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 45.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 45.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 45.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 44.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 44.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 44.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 44.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 44.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 44.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 43.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 43.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 43.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 43.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 43.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 43.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 43.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 43.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 43.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 43.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 42.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 42.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 42.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 42.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 41.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 41.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 41.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 41.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 41.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 40.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 40.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 40.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 40.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 40.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 40.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 40.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 39.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 39.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 39.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 39.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 38.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 38.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 38.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 38.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 37.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 37.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 37.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 37.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 37.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 37.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 37.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 37.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 37.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 36.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 36.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 36.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 36.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 36.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 36.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 36.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 36.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 36.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 35.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 35.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 35.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 35.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 35.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 34.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 34.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 34.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 34.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 34.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 34.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 33.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 33.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 33.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 33.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 33.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 33.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 33.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 33.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 32.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 32.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 32.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 32.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 32.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 31.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 31.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 31.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 31.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 31.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 30.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 30.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 29.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 29.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 29.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 29.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 29.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 28.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 28.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 28.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 27.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 27.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 27.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 27.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 27.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 26.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 26.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 26.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 25.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 25.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 24.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 24.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 24.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 24.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 24.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 23.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 23.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 22.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 22.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 22.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 22.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 21.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 21.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 21.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 21.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 20.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 20.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 20.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 20.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 20.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 19.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 19.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 19.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 19.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 19.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 18.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 18.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 18.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 18.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 17.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 17.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 17.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 17.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 17.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 16.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 16.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 16.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 16.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 15.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 15.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 15.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 15.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 14.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 13.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 13.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 13.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 12.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 10.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 10.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 10.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 9.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 7.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 7.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 7.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 139.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 139.4
FF:10164-103B2 76 years, female 139.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 47.3
Pig sample Sample description nTPM
Caudate
nTPM: 47.3
Samples: 4

Max nTPM: 63.2
Min nTPM: 34.5
Sample A Female 34.5
Sample B Female 45.0
Sample C Male 63.2
Sample D Male 46.5

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