HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:25.1 nTPM
HPA:25.1 nTPM
GTEx:17.0 nTPM
FANTOM5:21.4 Scaled Tags Per Million
Pig:8.3 nTPM
Mouse:59.3 nTPM
Allen mouse:15.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036722Antibody CAB000018
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.1
Sample id Sample description nTPM
Hippocampus
nTPM: 24.9
2529 Female, age 94, left hemisphere 26.9
2621 Female, age 67, right hemisphere 26.2
1911 Female, age 85, right hemisphere 24.8
1855 Male, age 76, left hemisphere 24.1
2148 Female, age 91, left hemisphere 24.0
1898 Male, age 80, left hemisphere 23.4
Dentate gyrus
nTPM: 24.6
2530 Female, age 94, left hemisphere 29.8
2531 Female, age 67, both hemispheres 26.3
2246 Female, age 85, both hemispheres 23.2
1927 Female, age 91, both hemispheres 22.8
2010 Male, age 76, both hemispheres 22.8
2528 Male, age 74, both hemispheres 22.8
Entorhinal gyrus
nTPM: 23.3
2686 Male, age 75, right hemisphere 24.6
1787 Male, age 76, left hemisphere 24.0
2613 Female, age 94, left hemisphere 23.6
2117 Female, age 91, right hemisphere 23.3
1938 Female, age 85, left hemisphere 22.2
2764 Male, age 80, right hemisphere 22.2
Hippocampus, CA1
nTPM: 22.1
2527 Male, age 74, both hemispheres 23.6
1873 Female, age 85, both hemispheres 23.0
2045 Male, age 76, both hemispheres 22.8
2749 Male, age 80, left hemisphere 20.9
2082 Female, age 91, right hemisphere 20.3
Hippocampus, CA2
nTPM: 23.5
2437 Female, age 94, left hemisphere 26.9
1963 Male, age 80, left hemisphere 24.6
1892 Male, age 76, both hemispheres 22.6
1940 Female, age 85, left hemisphere 22.4
2113 Female, age 91, right hemisphere 22.3
2249 Male, age 74, both hemispheres 22.3
Hippocampus, CA3
nTPM: 25.1
2861 Female, age 67, both hemispheres 32.1
1891 Female, age 85, both hemispheres 24.8
2137 Male, age 80, left hemisphere 24.0
1867 Male, age 76, both hemispheres 23.9
2620 Female, age 94, left hemisphere 23.8
2436 Male, age 74, both hemispheres 21.8
Parahippocampal cortex
nTPM: 23.7
2622 Female, age 67, right hemisphere 26.1
2018 Male, age 76, both hemispheres 24.7
2693 Female, age 94, both hemispheres 24.3
2692 Male, age 74, both hemispheres 24.1
2245 Female, age 91, both hemispheres 24.0
2532 Female, age 72, left hemisphere 23.7
1990 Female, age 91, right hemisphere 23.4
1850 Male, age 80, both hemispheres 22.8
1933 Female, age 85, both hemispheres 22.4
2250 Female, age 67, right hemisphere 21.6
Perirhinal gyrus
nTPM: 22.8
1841 Female, age 85, right hemisphere 24.5
2848 Male, age 76, right hemisphere 22.5
1794 Male, age 80, right hemisphere 22.4
2521 Female, age 94, right hemisphere 22.3
1847 Female, age 91, left hemisphere 22.1
Subiculum
nTPM: 24.2
2438 Female, age 94, left hemisphere 26.5
2042 Male, age 76, both hemispheres 25.1
2619 Male, age 74, both hemispheres 24.9
2729 Female, age 91, right hemisphere 23.3
1977 Female, age 85, both hemispheres 22.9
1901 Male, age 80, both hemispheres 22.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.0
Samples: 197

Max nTPM: 63.3
Min nTPM: 1.2
Std nTPM: 10.6
Median nTPM: 14.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 63.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 62.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 56.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 49.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 44.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 42.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 40.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 39.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 37.3
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 35.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 35.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.4
FF:10153-102I9 76 years, female 24.1
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.4
Samples: 4

Max nTPM: 8.3
Min nTPM: 5.4
Sample A Female 6.4
Sample B Female 5.4
Sample C Male 8.3
Sample D Male 5.5
Entorhinal cortex
nTPM: 8.4
Samples: 4

Max nTPM: 10.3
Min nTPM: 7.1
Sample A Female 8.7
Sample B Female 7.3
Sample C Male 10.3
Sample D Male 7.1
Subiculum
nTPM: 7.1
Samples: 4

Max nTPM: 8.1
Min nTPM: 4.5
Sample A Female 8.1
Sample B Female 4.5
Sample C Male 7.7
Sample D Male 8.0
Ventral hippocampus
nTPM: 7.7
Samples: 4

Max nTPM: 12.6
Min nTPM: 5.5
Sample A Female 5.7
Sample B Female 5.5
Sample C Male 12.6
Sample D Male 7.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.3
Samples: 4

Max nTPM: 80.7
Min nTPM: 36.8
Sample A Male 69.7
Sample B Male 80.7
Sample C Female 49.9
Sample D Female 36.8
Hippocampal formation
nTPM: 36.8
Samples: 4

Max nTPM: 39.3
Min nTPM: 33.1
Sample A Male 39.1
Sample B Male 33.1
Sample C Female 35.6
Sample D Female 39.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.2
67936418 Antisense, RP_040617_02_D08, Mouse strain C57BL/6J (56 days, male) 16.4
74047898 Antisense, RP_051214_02_B08, Mouse strain C57BL/6J (56 days, male) 13.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.