HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:43.8 nTPM
HPA:43.8 nTPM
GTEx:44.4 nTPM
FANTOM5:121.9 Scaled Tags Per Million
Pig:35.5 nTPM
Mouse:190.3 nTPM
Allen mouse:15.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000528
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.8
Sample id Sample description nTPM
Hippocampus
nTPM: 39.4
1898 Male, age 80, left hemisphere 43.4
2621 Female, age 67, right hemisphere 41.7
1855 Male, age 76, left hemisphere 40.8
2148 Female, age 91, left hemisphere 40.8
2529 Female, age 94, left hemisphere 37.6
1911 Female, age 85, right hemisphere 32.3
Dentate gyrus
nTPM: 36.5
1927 Female, age 91, both hemispheres 41.5
2010 Male, age 76, both hemispheres 37.2
2530 Female, age 94, left hemisphere 36.5
2246 Female, age 85, both hemispheres 36.2
2528 Male, age 74, both hemispheres 34.3
2531 Female, age 67, both hemispheres 33.6
Entorhinal gyrus
nTPM: 37.9
2764 Male, age 80, right hemisphere 41.1
2686 Male, age 75, right hemisphere 40.2
1787 Male, age 76, left hemisphere 38.9
2613 Female, age 94, left hemisphere 38.5
1938 Female, age 85, left hemisphere 34.7
2117 Female, age 91, right hemisphere 34.0
Hippocampus, CA1
nTPM: 41.0
2749 Male, age 80, left hemisphere 55.3
2045 Male, age 76, both hemispheres 40.6
2527 Male, age 74, both hemispheres 40.0
1873 Female, age 85, both hemispheres 37.8
2082 Female, age 91, right hemisphere 31.6
Hippocampus, CA2
nTPM: 40.4
1892 Male, age 76, both hemispheres 52.0
1963 Male, age 80, left hemisphere 44.8
2437 Female, age 94, left hemisphere 40.5
1940 Female, age 85, left hemisphere 36.2
2113 Female, age 91, right hemisphere 34.6
2249 Male, age 74, both hemispheres 34.1
Hippocampus, CA3
nTPM: 41.6
2137 Male, age 80, left hemisphere 47.4
1867 Male, age 76, both hemispheres 44.6
2436 Male, age 74, both hemispheres 41.0
2861 Female, age 67, both hemispheres 40.9
2620 Female, age 94, left hemisphere 40.1
1891 Female, age 85, both hemispheres 35.7
Parahippocampal cortex
nTPM: 40.4
1850 Male, age 80, both hemispheres 48.1
2245 Female, age 91, both hemispheres 44.1
2692 Male, age 74, both hemispheres 43.3
2622 Female, age 67, right hemisphere 42.0
2693 Female, age 94, both hemispheres 40.7
1990 Female, age 91, right hemisphere 39.5
2532 Female, age 72, left hemisphere 38.4
2250 Female, age 67, right hemisphere 36.7
1933 Female, age 85, both hemispheres 36.6
2018 Male, age 76, both hemispheres 34.8
Perirhinal gyrus
nTPM: 43.8
1847 Female, age 91, left hemisphere 46.2
1794 Male, age 80, right hemisphere 45.9
2848 Male, age 76, right hemisphere 45.1
1841 Female, age 85, right hemisphere 41.5
2521 Female, age 94, right hemisphere 40.4
Subiculum
nTPM: 37.2
2438 Female, age 94, left hemisphere 45.2
1901 Male, age 80, both hemispheres 40.3
2619 Male, age 74, both hemispheres 38.2
2729 Female, age 91, right hemisphere 34.3
1977 Female, age 85, both hemispheres 33.4
2042 Male, age 76, both hemispheres 31.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.4
Samples: 197

Max nTPM: 80.9
Min nTPM: 26.2
Std nTPM: 11.2
Median nTPM: 42.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 80.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 77.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 77.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 75.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 73.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 72.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 67.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 66.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 65.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 65.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 65.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 121.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 121.9
FF:10153-102I9 76 years, female 133.0
FF:10169-103B7 60 years, female 110.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 35.2
Min nTPM: 26.9
Sample A Female 35.2
Sample B Female 31.6
Sample C Male 33.8
Sample D Male 26.9
Entorhinal cortex
nTPM: 35.5
Samples: 4

Max nTPM: 40.1
Min nTPM: 31.5
Sample A Female 40.1
Sample B Female 36.9
Sample C Male 31.5
Sample D Male 33.4
Subiculum
nTPM: 32.7
Samples: 4

Max nTPM: 42.0
Min nTPM: 28.7
Sample A Female 42.0
Sample B Female 28.7
Sample C Male 30.4
Sample D Male 29.5
Ventral hippocampus
nTPM: 31.6
Samples: 4

Max nTPM: 40.0
Min nTPM: 24.4
Sample A Female 32.3
Sample B Female 24.4
Sample C Male 40.0
Sample D Male 29.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 190.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 190.4
Samples: 4

Max nTPM: 200.4
Min nTPM: 183.8
Sample A Male 192.1
Sample B Male 200.4
Sample C Female 185.1
Sample D Female 183.8
Hippocampal formation
nTPM: 182.9
Samples: 4

Max nTPM: 195.1
Min nTPM: 172.6
Sample A Male 195.1
Sample B Male 178.1
Sample C Female 185.7
Sample D Female 172.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.9
68844295 Antisense, RP_050222_01_C09, Mouse strain C57BL/6J (56 days, male) 15.9

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