HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:20.5 nTPM
HPA:20.5 nTPM
GTEx:50.7 nTPM
FANTOM5:36.9 Scaled Tags Per Million
Pig:54.2 nTPM
Mouse:70.8 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.5
Sample id Sample description nTPM
Hippocampus
nTPM: 10.5
2621 Female, age 67, right hemisphere 21.6
2148 Female, age 91, left hemisphere 12.8
1911 Female, age 85, right hemisphere 9.8
2529 Female, age 94, left hemisphere 7.3
1855 Male, age 76, left hemisphere 7.1
1898 Male, age 80, left hemisphere 4.5
Dentate gyrus
nTPM: 11.8
2531 Female, age 67, both hemispheres 28.4
1927 Female, age 91, both hemispheres 16.9
2530 Female, age 94, left hemisphere 9.5
2246 Female, age 85, both hemispheres 7.4
2528 Male, age 74, both hemispheres 4.6
2010 Male, age 76, both hemispheres 4.2
Entorhinal gyrus
nTPM: 20.5
2613 Female, age 94, left hemisphere 38.7
2686 Male, age 75, right hemisphere 31.9
2764 Male, age 80, right hemisphere 20.1
1787 Male, age 76, left hemisphere 17.4
1938 Female, age 85, left hemisphere 11.8
2117 Female, age 91, right hemisphere 2.9
Hippocampus, CA1
nTPM: 11.2
2749 Male, age 80, left hemisphere 24.6
2527 Male, age 74, both hemispheres 11.3
2045 Male, age 76, both hemispheres 10.7
2082 Female, age 91, right hemisphere 5.6
1873 Female, age 85, both hemispheres 3.8
Hippocampus, CA2
nTPM: 7.9
2437 Female, age 94, left hemisphere 18.1
1892 Male, age 76, both hemispheres 13.4
2113 Female, age 91, right hemisphere 6.5
1963 Male, age 80, left hemisphere 5.2
2249 Male, age 74, both hemispheres 2.5
1940 Female, age 85, left hemisphere 1.9
Hippocampus, CA3
nTPM: 18.6
2620 Female, age 94, left hemisphere 34.9
2137 Male, age 80, left hemisphere 32.1
2861 Female, age 67, both hemispheres 30.1
1867 Male, age 76, both hemispheres 12.0
1891 Female, age 85, both hemispheres 2.3
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 18.7
2622 Female, age 67, right hemisphere 41.7
2245 Female, age 91, both hemispheres 25.9
2693 Female, age 94, both hemispheres 25.4
2532 Female, age 72, left hemisphere 21.8
2250 Female, age 67, right hemisphere 14.8
1990 Female, age 91, right hemisphere 14.0
2692 Male, age 74, both hemispheres 13.9
1933 Female, age 85, both hemispheres 11.2
1850 Male, age 80, both hemispheres 10.9
2018 Male, age 76, both hemispheres 7.6
Perirhinal gyrus
nTPM: 18.1
2521 Female, age 94, right hemisphere 21.3
1794 Male, age 80, right hemisphere 19.6
1847 Female, age 91, left hemisphere 17.7
1841 Female, age 85, right hemisphere 16.8
2848 Male, age 76, right hemisphere 15.1
Subiculum
nTPM: 9.9
2619 Male, age 74, both hemispheres 13.8
1901 Male, age 80, both hemispheres 12.6
1977 Female, age 85, both hemispheres 12.4
2438 Female, age 94, left hemisphere 8.8
2042 Male, age 76, both hemispheres 7.9
2729 Female, age 91, right hemisphere 3.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.7
Samples: 197

Max nTPM: 125.5
Min nTPM: 8.0
Std nTPM: 19.8
Median nTPM: 48.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 125.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 124.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 97.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 95.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 87.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 84.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 84.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 84.1
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 83.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 83.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 82.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.9
FF:10153-102I9 76 years, female 42.5
FF:10169-103B7 60 years, female 31.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.9
Samples: 4

Max nTPM: 47.6
Min nTPM: 33.2
Sample A Female 47.6
Sample B Female 44.2
Sample C Male 42.7
Sample D Male 33.2
Entorhinal cortex
nTPM: 54.2
Samples: 4

Max nTPM: 63.6
Min nTPM: 47.6
Sample A Female 54.4
Sample B Female 47.6
Sample C Male 63.6
Sample D Male 51.0
Subiculum
nTPM: 44.7
Samples: 4

Max nTPM: 60.1
Min nTPM: 37.1
Sample A Female 60.1
Sample B Female 39.7
Sample C Male 41.8
Sample D Male 37.1
Ventral hippocampus
nTPM: 42.6
Samples: 4

Max nTPM: 52.2
Min nTPM: 31.8
Sample A Female 36.0
Sample B Female 31.8
Sample C Male 52.2
Sample D Male 50.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.5
Samples: 4

Max nTPM: 74.5
Min nTPM: 66.5
Sample A Male 66.5
Sample B Male 74.5
Sample C Female 68.3
Sample D Female 72.8
Hippocampal formation
nTPM: 70.8
Samples: 4

Max nTPM: 78.1
Min nTPM: 61.4
Sample A Male 61.4
Sample B Male 78.1
Sample C Female 77.0
Sample D Female 66.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
73513582 Antisense, RP_051121_02_D03, Mouse strain C57BL/6J (56 days, male) 1.3

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