HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:32.2 nTPM
HPA:32.2 nTPM
GTEx:28.2 nTPM
FANTOM5:81.3 Scaled Tags Per Million
Pig:45.0 nTPM
Mouse:12.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.2
Sample id Sample description nTPM
Hippocampus
nTPM: 30.2
1898 Male, age 80, left hemisphere 34.0
1855 Male, age 76, left hemisphere 31.5
2148 Female, age 91, left hemisphere 29.7
1911 Female, age 85, right hemisphere 29.6
2529 Female, age 94, left hemisphere 28.8
2621 Female, age 67, right hemisphere 27.4
Dentate gyrus
nTPM: 30.5
1927 Female, age 91, both hemispheres 32.9
2010 Male, age 76, both hemispheres 32.2
2528 Male, age 74, both hemispheres 32.1
2530 Female, age 94, left hemisphere 30.9
2246 Female, age 85, both hemispheres 29.2
2531 Female, age 67, both hemispheres 25.9
Entorhinal gyrus
nTPM: 27.3
2117 Female, age 91, right hemisphere 30.5
1938 Female, age 85, left hemisphere 29.2
1787 Male, age 76, left hemisphere 26.9
2764 Male, age 80, right hemisphere 26.2
2613 Female, age 94, left hemisphere 26.0
2686 Male, age 75, right hemisphere 25.3
Hippocampus, CA1
nTPM: 32.2
2749 Male, age 80, left hemisphere 37.5
1873 Female, age 85, both hemispheres 35.0
2527 Male, age 74, both hemispheres 32.0
2045 Male, age 76, both hemispheres 30.1
2082 Female, age 91, right hemisphere 26.4
Hippocampus, CA2
nTPM: 30.9
1892 Male, age 76, both hemispheres 37.0
1963 Male, age 80, left hemisphere 36.4
2249 Male, age 74, both hemispheres 30.4
2437 Female, age 94, left hemisphere 28.0
2113 Female, age 91, right hemisphere 27.1
1940 Female, age 85, left hemisphere 26.3
Hippocampus, CA3
nTPM: 29.9
2137 Male, age 80, left hemisphere 33.6
1867 Male, age 76, both hemispheres 31.2
1891 Female, age 85, both hemispheres 30.4
2436 Male, age 74, both hemispheres 30.3
2861 Female, age 67, both hemispheres 27.7
2620 Female, age 94, left hemisphere 26.2
Parahippocampal cortex
nTPM: 28.2
2692 Male, age 74, both hemispheres 32.1
1850 Male, age 80, both hemispheres 30.8
1933 Female, age 85, both hemispheres 29.2
2250 Female, age 67, right hemisphere 28.8
2693 Female, age 94, both hemispheres 28.6
1990 Female, age 91, right hemisphere 28.5
2245 Female, age 91, both hemispheres 27.1
2532 Female, age 72, left hemisphere 26.5
2018 Male, age 76, both hemispheres 26.1
2622 Female, age 67, right hemisphere 24.0
Perirhinal gyrus
nTPM: 28.6
1847 Female, age 91, left hemisphere 30.0
1841 Female, age 85, right hemisphere 29.2
2521 Female, age 94, right hemisphere 29.1
1794 Male, age 80, right hemisphere 28.2
2848 Male, age 76, right hemisphere 26.7
Subiculum
nTPM: 29.0
2729 Female, age 91, right hemisphere 30.8
1901 Male, age 80, both hemispheres 30.5
2619 Male, age 74, both hemispheres 29.0
1977 Female, age 85, both hemispheres 28.9
2438 Female, age 94, left hemisphere 28.6
2042 Male, age 76, both hemispheres 26.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.2
Samples: 197

Max nTPM: 40.5
Min nTPM: 13.5
Std nTPM: 4.3
Median nTPM: 27.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 40.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 39.7
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 37.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 37.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 36.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 36.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 36.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 36.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 36.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 36.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 36.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.3
FF:10169-103B7 60 years, female 98.3
FF:10153-102I9 76 years, female 64.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.0
Samples: 4

Max nTPM: 66.3
Min nTPM: 32.5
Sample A Female 66.3
Sample B Female 46.1
Sample C Male 35.0
Sample D Male 32.5
Entorhinal cortex
nTPM: 36.1
Samples: 4

Max nTPM: 58.4
Min nTPM: 25.2
Sample A Female 28.7
Sample B Female 58.4
Sample C Male 32.0
Sample D Male 25.2
Subiculum
nTPM: 33.9
Samples: 4

Max nTPM: 47.1
Min nTPM: 22.3
Sample A Female 47.1
Sample B Female 33.5
Sample C Male 22.3
Sample D Male 32.7
Ventral hippocampus
nTPM: 32.5
Samples: 4

Max nTPM: 39.3
Min nTPM: 25.4
Sample A Female 36.2
Sample B Female 25.4
Sample C Male 29.0
Sample D Male 39.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 13.0
Min nTPM: 11.8
Sample A Male 11.8
Sample B Male 13.0
Sample C Female 13.0
Sample D Female 12.3
Hippocampal formation
nTPM: 12.8
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.6
Sample A Male 13.4
Sample B Male 12.7
Sample C Female 13.3
Sample D Female 11.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69134444 Antisense, RP_050321_02_H09, Mouse strain C57BL/6J (56 days, male) 0.0

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