HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:43.7 nTPM
HPA:43.7 nTPM
GTEx:44.3 nTPM
FANTOM5:201.3 Scaled Tags Per Million
Pig:98.5 nTPM
Mouse:170.5 nTPM
Allen mouse:20.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064471
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.7
Sample id Sample description nTPM
Hippocampus
nTPM: 28.3
2621 Female, age 67, right hemisphere 41.4
1898 Male, age 80, left hemisphere 38.9
1855 Male, age 76, left hemisphere 31.6
2148 Female, age 91, left hemisphere 23.1
1911 Female, age 85, right hemisphere 19.9
2529 Female, age 94, left hemisphere 15.1
Dentate gyrus
nTPM: 34.9
2530 Female, age 94, left hemisphere 52.4
1927 Female, age 91, both hemispheres 44.9
2010 Male, age 76, both hemispheres 33.5
2531 Female, age 67, both hemispheres 33.1
2246 Female, age 85, both hemispheres 27.3
2528 Male, age 74, both hemispheres 18.4
Entorhinal gyrus
nTPM: 39.8
2613 Female, age 94, left hemisphere 74.6
2764 Male, age 80, right hemisphere 47.4
1787 Male, age 76, left hemisphere 42.6
1938 Female, age 85, left hemisphere 38.9
2686 Male, age 75, right hemisphere 21.0
2117 Female, age 91, right hemisphere 14.2
Hippocampus, CA1
nTPM: 38.9
2749 Male, age 80, left hemisphere 74.8
2045 Male, age 76, both hemispheres 42.2
1873 Female, age 85, both hemispheres 33.1
2527 Male, age 74, both hemispheres 26.5
2082 Female, age 91, right hemisphere 17.8
Hippocampus, CA2
nTPM: 30.9
1892 Male, age 76, both hemispheres 49.7
2437 Female, age 94, left hemisphere 47.1
1963 Male, age 80, left hemisphere 38.3
1940 Female, age 85, left hemisphere 22.6
2249 Male, age 74, both hemispheres 15.4
2113 Female, age 91, right hemisphere 12.2
Hippocampus, CA3
nTPM: 35.7
2620 Female, age 94, left hemisphere 59.0
2137 Male, age 80, left hemisphere 48.6
1867 Male, age 76, both hemispheres 37.6
2861 Female, age 67, both hemispheres 31.0
1891 Female, age 85, both hemispheres 22.1
2436 Male, age 74, both hemispheres 15.8
Parahippocampal cortex
nTPM: 32.1
1990 Female, age 91, right hemisphere 42.3
2693 Female, age 94, both hemispheres 40.6
1850 Male, age 80, both hemispheres 38.2
2245 Female, age 91, both hemispheres 36.5
2250 Female, age 67, right hemisphere 36.2
1933 Female, age 85, both hemispheres 30.7
2532 Female, age 72, left hemisphere 30.5
2622 Female, age 67, right hemisphere 28.3
2692 Male, age 74, both hemispheres 19.6
2018 Male, age 76, both hemispheres 17.9
Perirhinal gyrus
nTPM: 43.7
1847 Female, age 91, left hemisphere 60.8
2521 Female, age 94, right hemisphere 48.5
1794 Male, age 80, right hemisphere 48.0
2848 Male, age 76, right hemisphere 32.2
1841 Female, age 85, right hemisphere 29.0
Subiculum
nTPM: 27.0
2438 Female, age 94, left hemisphere 38.6
1977 Female, age 85, both hemispheres 36.9
1901 Male, age 80, both hemispheres 34.5
2619 Male, age 74, both hemispheres 26.8
2042 Male, age 76, both hemispheres 17.3
2729 Female, age 91, right hemisphere 8.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.3
Samples: 197

Max nTPM: 126.3
Min nTPM: 4.5
Std nTPM: 24.8
Median nTPM: 40.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 126.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 116.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 104.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 98.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 98.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 97.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 96.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 95.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 93.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 91.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 91.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 201.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 201.3
FF:10169-103B7 60 years, female 236.4
FF:10153-102I9 76 years, female 166.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 98.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 98.6
Samples: 4

Max nTPM: 123.2
Min nTPM: 68.0
Sample A Female 123.2
Sample B Female 119.7
Sample C Male 68.0
Sample D Male 83.3
Entorhinal cortex
nTPM: 97.9
Samples: 4

Max nTPM: 123.1
Min nTPM: 85.2
Sample A Female 123.1
Sample B Female 85.2
Sample C Male 93.1
Sample D Male 90.1
Subiculum
nTPM: 77.6
Samples: 4

Max nTPM: 107.7
Min nTPM: 60.6
Sample A Female 107.7
Sample B Female 61.5
Sample C Male 80.7
Sample D Male 60.6
Ventral hippocampus
nTPM: 98.2
Samples: 4

Max nTPM: 120.2
Min nTPM: 56.6
Sample A Female 97.3
Sample B Female 56.6
Sample C Male 120.2
Sample D Male 118.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 170.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 142.8
Samples: 4

Max nTPM: 170.2
Min nTPM: 128.2
Sample A Male 141.6
Sample B Male 128.2
Sample C Female 131.3
Sample D Female 170.2
Hippocampal formation
nTPM: 170.5
Samples: 4

Max nTPM: 215.6
Min nTPM: 129.2
Sample A Male 129.2
Sample B Male 174.4
Sample C Female 215.6
Sample D Female 162.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.0
1408 Antisense, RP_040625_02_B11, Mouse strain C57BL/6J (56 days, male) 20.0
1407 Antisense, RP_040625_02_B11, Mouse strain C57BL/6J (56 days, male) 6.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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