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ASPHD1
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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:110.4 nTPM
HPA:110.4 nTPM
GTEx:116.2 nTPM
FANTOM5:69.4 Scaled Tags Per Million
Pig:28.1 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 110.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 98.5
2194 Female, age 79, both hemispheres 106.2
2565 Male, age 75, midline 104.0
2816 Male, age 47, midline 96.7
1981 Female, age 72, midline 94.5
2048 Male, age 55, midline 91.2
Cervical spinal cord, dorsal horn
nTPM: 95.5
2173 Female, age 72, unknown 97.6
2297 Male, age 75, both hemispheres 97.6
1877 Male, age 55, unknown 97.5
2296 Male, age 66, both hemispheres 96.7
2069 Male, age 47, both hemispheres 94.9
2721 Male, age 90, both hemispheres 89.0
Cervical spinal cord, ventral horn
nTPM: 110.4
2480 Male, age 75, both hemispheres 135.8
2809 Male, age 90, both hemispheres 112.5
2820 Female, age 79, both hemispheres 110.1
2068 Male, age 55, unknown 109.3
2295 Male, age 66, both hemispheres 105.9
2098 Female, age 72, unknown 88.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 116.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 116.2
Samples: 159

Max nTPM: 367.1
Min nTPM: 36.1
Std nTPM: 52.5
Median nTPM: 105.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 367.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 291.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 272.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 261.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 249.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 248.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 228.4
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 224.7
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 222.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 208.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 205.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 192.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 188.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 184.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 184.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 178.2
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 178.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 177.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 176.1
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 174.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 172.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 171.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 171.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 169.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 167.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 158.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 157.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 155.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 153.3
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 151.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 150.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 149.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 148.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 147.5
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 145.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 145.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 144.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 142.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 141.4
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 141.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 140.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 140.0
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 139.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 139.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 136.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 136.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 134.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 132.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 130.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 127.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 126.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 125.4
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 123.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 122.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 121.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 121.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 121.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 120.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 120.0
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 119.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 118.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 118.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 116.9
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 116.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 115.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 114.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 112.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 112.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 112.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 111.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 111.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 111.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 109.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 108.7
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 106.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 106.3
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 105.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 105.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 105.7
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 105.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 105.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 103.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 103.7
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 103.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 103.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 102.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 101.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 101.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 100.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 100.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 98.3
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 98.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 97.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 94.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 94.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 93.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 93.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 92.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 92.5
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 92.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 92.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 91.4
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 91.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 90.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 88.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 87.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 87.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 87.2
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 86.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 86.6
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 86.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 86.3
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 85.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 84.3
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 83.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 83.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 81.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 79.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 79.8
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 79.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 78.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 78.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 78.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 77.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 77.1
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 76.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 75.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 73.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 73.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 73.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 73.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 70.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 70.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 69.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 68.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 68.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 67.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 67.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 67.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 66.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 65.6
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 65.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 65.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 64.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 64.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 62.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 62.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 62.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 61.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 61.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 59.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 51.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 48.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 48.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 43.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 38.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 38.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 37.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 36.1
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 69.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 69.4
FF:10181-103D1 60 years, female 71.0
FF:10159-103A6 76 years, female 67.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 28.1
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 12.4
Samples: 4

Max nTPM: 22.1
Min nTPM: 4.6
Sample A Female 22.1
Sample B Female 6.8
Sample C Male 4.6
Sample D Male 15.9
Ventral spinal cord
nTPM: 28.1
Samples: 4

Max nTPM: 34.4
Min nTPM: 13.9
Sample A Female 34.4
Sample B Female 32.2
Sample C Male 31.9
Sample D Male 13.9

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