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MARCKSL1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:208.9 nTPM
FANTOM5:208.5 Scaled Tags Per Million
Pig:117.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA030528Antibody CAB020787
Glial cells LowMedium
Neuronal cells Not detectedLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 208.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 208.9
Samples: 246

Max nTPM: 495.1
Min nTPM: 68.3
Std nTPM: 72.1
Median nTPM: 198.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 495.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 438.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 407.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 396.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 393.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 383.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 375.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 371.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 356.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 340.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 338.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 329.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 325.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 324.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 318.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 317.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 317.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 310.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 309.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 305.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 305.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 304.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 303.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 303.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 302.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 302.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 301.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 300.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 299.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 296.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 295.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 294.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 290.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 290.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 289.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 285.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 285.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 284.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 283.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 282.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 282.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 281.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 280.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 280.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 274.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 274.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 272.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 272.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 271.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 271.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 271.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 271.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 269.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 267.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 267.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 264.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 263.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 263.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 262.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 262.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 260.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 258.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 257.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 257.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 256.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 254.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 253.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 253.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 250.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 248.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 247.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 247.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 246.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 246.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 246.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 244.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 244.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 243.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 242.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 242.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 242.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 239.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 238.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 235.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 233.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 231.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 231.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 231.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 228.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 227.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 226.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 224.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 221.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 221.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 221.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 220.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 220.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 219.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 217.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 216.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 215.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 213.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 213.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 212.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 211.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 210.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 210.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 209.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 208.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 208.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 207.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 207.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 205.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 205.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 204.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 203.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 201.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 201.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 199.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 199.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 199.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 199.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 198.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 197.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 197.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 197.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 195.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 195.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 194.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 194.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 193.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 192.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 189.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 189.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 189.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 188.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 187.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 187.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 187.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 187.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 187.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 186.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 184.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 182.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 181.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 180.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 179.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 178.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 178.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 178.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 178.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 178.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 177.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 177.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 175.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 174.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 173.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 172.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 172.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 170.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 170.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 170.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 169.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 167.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 166.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 165.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 165.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 164.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 163.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 163.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 162.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 162.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 162.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 162.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 161.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 161.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 161.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 160.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 158.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 156.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 156.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 156.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 156.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 155.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 155.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 155.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 153.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 152.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 152.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 151.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 151.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 150.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 149.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 149.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 148.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 148.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 147.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 145.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 144.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 144.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 143.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 142.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 141.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 139.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 139.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 138.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 138.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 135.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 135.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 134.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 133.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 132.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 132.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 131.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 130.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 129.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 129.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 127.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 122.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 122.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 121.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 120.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 120.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 118.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 118.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 117.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 117.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 117.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 116.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 116.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 115.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 114.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 114.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 113.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 110.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 105.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 105.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 104.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 103.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 101.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 100.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 91.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 89.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 86.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 82.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 68.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 208.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 208.5
FF:10164-103B2 76 years, female 208.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 117.1
Pig sample Sample description nTPM
Caudate
nTPM: 117.1
Samples: 4

Max nTPM: 128.3
Min nTPM: 105.9
Sample A Female 128.3
Sample B Female 108.4
Sample C Male 125.6
Sample D Male 105.9

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