HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.7 nTPM
HPA:20.7 nTPM
GTEx:19.5 nTPM
FANTOM5:641.5 Scaled Tags Per Million
Pig:159.7 nTPM
Mouse:76.8 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010024
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.5
2621 Female, age 67, right hemisphere 18.6
1898 Male, age 80, left hemisphere 16.9
1911 Female, age 85, right hemisphere 14.6
2148 Female, age 91, left hemisphere 14.4
1855 Male, age 76, left hemisphere 12.0
2529 Female, age 94, left hemisphere 10.5
Dentate gyrus
nTPM: 14.1
1927 Female, age 91, both hemispheres 30.3
2528 Male, age 74, both hemispheres 16.5
2530 Female, age 94, left hemisphere 10.3
2010 Male, age 76, both hemispheres 9.6
2246 Female, age 85, both hemispheres 9.2
2531 Female, age 67, both hemispheres 9.0
Entorhinal gyrus
nTPM: 12.8
1938 Female, age 85, left hemisphere 22.2
1787 Male, age 76, left hemisphere 15.7
2613 Female, age 94, left hemisphere 15.2
2117 Female, age 91, right hemisphere 13.2
2764 Male, age 80, right hemisphere 10.8
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 20.7
2749 Male, age 80, left hemisphere 41.7
2527 Male, age 74, both hemispheres 23.4
1873 Female, age 85, both hemispheres 20.7
2045 Male, age 76, both hemispheres 14.7
2082 Female, age 91, right hemisphere 3.1
Hippocampus, CA2
nTPM: 16.9
1892 Male, age 76, both hemispheres 26.6
1963 Male, age 80, left hemisphere 26.4
2249 Male, age 74, both hemispheres 18.6
2113 Female, age 91, right hemisphere 12.0
1940 Female, age 85, left hemisphere 10.9
2437 Female, age 94, left hemisphere 7.1
Hippocampus, CA3
nTPM: 14.0
2137 Male, age 80, left hemisphere 29.2
1867 Male, age 76, both hemispheres 15.1
1891 Female, age 85, both hemispheres 14.7
2620 Female, age 94, left hemisphere 12.8
2436 Male, age 74, both hemispheres 10.3
2861 Female, age 67, both hemispheres 2.0
Parahippocampal cortex
nTPM: 14.6
2250 Female, age 67, right hemisphere 25.4
1990 Female, age 91, right hemisphere 22.9
1850 Male, age 80, both hemispheres 20.6
1933 Female, age 85, both hemispheres 16.1
2245 Female, age 91, both hemispheres 13.8
2692 Male, age 74, both hemispheres 12.1
2532 Female, age 72, left hemisphere 10.8
2622 Female, age 67, right hemisphere 9.0
2693 Female, age 94, both hemispheres 8.5
2018 Male, age 76, both hemispheres 7.0
Perirhinal gyrus
nTPM: 19.2
1847 Female, age 91, left hemisphere 26.5
1841 Female, age 85, right hemisphere 25.8
1794 Male, age 80, right hemisphere 19.1
2521 Female, age 94, right hemisphere 16.8
2848 Male, age 76, right hemisphere 7.7
Subiculum
nTPM: 12.0
1901 Male, age 80, both hemispheres 17.3
2619 Male, age 74, both hemispheres 16.7
1977 Female, age 85, both hemispheres 14.5
2729 Female, age 91, right hemisphere 11.5
2438 Female, age 94, left hemisphere 9.8
2042 Male, age 76, both hemispheres 2.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.5
Samples: 197

Max nTPM: 41.4
Min nTPM: 2.5
Std nTPM: 6.2
Median nTPM: 19.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 41.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 39.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 35.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 34.8
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 33.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 33.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 32.3
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 30.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 30.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 30.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 29.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 641.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 641.5
FF:10169-103B7 60 years, female 646.6
FF:10153-102I9 76 years, female 636.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 159.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 159.7
Samples: 4

Max nTPM: 201.4
Min nTPM: 120.2
Sample A Female 172.6
Sample B Female 144.7
Sample C Male 120.2
Sample D Male 201.4
Entorhinal cortex
nTPM: 132.6
Samples: 4

Max nTPM: 143.3
Min nTPM: 123.8
Sample A Female 143.3
Sample B Female 139.1
Sample C Male 124.0
Sample D Male 123.8
Subiculum
nTPM: 99.9
Samples: 4

Max nTPM: 127.7
Min nTPM: 69.8
Sample A Female 127.7
Sample B Female 97.7
Sample C Male 69.8
Sample D Male 104.5
Ventral hippocampus
nTPM: 79.0
Samples: 4

Max nTPM: 126.6
Min nTPM: 53.8
Sample A Female 61.3
Sample B Female 74.1
Sample C Male 53.8
Sample D Male 126.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 76.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 76.9
Samples: 4

Max nTPM: 85.3
Min nTPM: 71.0
Sample A Male 78.1
Sample B Male 73.1
Sample C Female 71.0
Sample D Female 85.3
Hippocampal formation
nTPM: 75.1
Samples: 4

Max nTPM: 91.9
Min nTPM: 66.1
Sample A Male 66.1
Sample B Male 76.1
Sample C Female 91.9
Sample D Female 66.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
70278015 Antisense, RP_050531_02_B12, Mouse strain C57BL/6J (56 days, male) 2.1
73635999 Antisense, RP_051101_03_D02, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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