HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:68.2 nTPM
HPA:68.2 nTPM
GTEx:87.7 nTPM
FANTOM5:70.0 Scaled Tags Per Million
Pig:23.6 nTPM
Mouse:447.9 nTPM
Allen mouse:18.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042800
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.2
Sample id Sample description nTPM
Hippocampus
nTPM: 50.8
1898 Male, age 80, left hemisphere 63.5
1911 Female, age 85, right hemisphere 58.6
2621 Female, age 67, right hemisphere 55.5
2148 Female, age 91, left hemisphere 48.4
1855 Male, age 76, left hemisphere 41.1
2529 Female, age 94, left hemisphere 37.4
Dentate gyrus
nTPM: 52.6
1927 Female, age 91, both hemispheres 67.7
2531 Female, age 67, both hemispheres 62.1
2010 Male, age 76, both hemispheres 49.7
2246 Female, age 85, both hemispheres 49.2
2530 Female, age 94, left hemisphere 44.9
2528 Male, age 74, both hemispheres 42.0
Entorhinal gyrus
nTPM: 49.1
2613 Female, age 94, left hemisphere 63.0
2764 Male, age 80, right hemisphere 61.5
1938 Female, age 85, left hemisphere 53.7
1787 Male, age 76, left hemisphere 49.5
2686 Male, age 75, right hemisphere 35.5
2117 Female, age 91, right hemisphere 31.5
Hippocampus, CA1
nTPM: 68.2
2749 Male, age 80, left hemisphere 146.5
1873 Female, age 85, both hemispheres 56.1
2045 Male, age 76, both hemispheres 50.6
2527 Male, age 74, both hemispheres 44.6
2082 Female, age 91, right hemisphere 43.0
Hippocampus, CA2
nTPM: 47.0
1963 Male, age 80, left hemisphere 67.7
1892 Male, age 76, both hemispheres 50.5
2249 Male, age 74, both hemispheres 42.0
1940 Female, age 85, left hemisphere 41.6
2113 Female, age 91, right hemisphere 41.4
2437 Female, age 94, left hemisphere 38.7
Hippocampus, CA3
nTPM: 66.9
2137 Male, age 80, left hemisphere 129.9
2620 Female, age 94, left hemisphere 70.1
2861 Female, age 67, both hemispheres 57.4
1867 Male, age 76, both hemispheres 52.6
1891 Female, age 85, both hemispheres 48.6
2436 Male, age 74, both hemispheres 42.9
Parahippocampal cortex
nTPM: 46.2
2245 Female, age 91, both hemispheres 56.2
1933 Female, age 85, both hemispheres 53.7
1850 Male, age 80, both hemispheres 53.5
2250 Female, age 67, right hemisphere 49.2
1990 Female, age 91, right hemisphere 46.6
2532 Female, age 72, left hemisphere 45.1
2018 Male, age 76, both hemispheres 43.7
2693 Female, age 94, both hemispheres 42.7
2622 Female, age 67, right hemisphere 40.6
2692 Male, age 74, both hemispheres 30.3
Perirhinal gyrus
nTPM: 54.7
1847 Female, age 91, left hemisphere 69.1
1794 Male, age 80, right hemisphere 61.0
2521 Female, age 94, right hemisphere 53.3
1841 Female, age 85, right hemisphere 53.1
2848 Male, age 76, right hemisphere 37.1
Subiculum
nTPM: 45.0
1901 Male, age 80, both hemispheres 67.7
1977 Female, age 85, both hemispheres 53.2
2042 Male, age 76, both hemispheres 45.5
2729 Female, age 91, right hemisphere 38.6
2619 Male, age 74, both hemispheres 33.4
2438 Female, age 94, left hemisphere 31.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.7
Samples: 197

Max nTPM: 278.7
Min nTPM: 17.6
Std nTPM: 51.6
Median nTPM: 81.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 278.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 252.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 245.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 229.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 226.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 219.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 202.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 192.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 185.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 181.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 178.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.0
FF:10169-103B7 60 years, female 100.4
FF:10153-102I9 76 years, female 39.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 29.7
Min nTPM: 18.3
Sample A Female 29.7
Sample B Female 26.7
Sample C Male 18.3
Sample D Male 19.7
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 17.1
Min nTPM: 14.7
Sample A Female 16.9
Sample B Female 17.1
Sample C Male 16.5
Sample D Male 14.7
Subiculum
nTPM: 14.6
Samples: 4

Max nTPM: 17.1
Min nTPM: 11.4
Sample A Female 17.1
Sample B Female 13.9
Sample C Male 16.1
Sample D Male 11.4
Ventral hippocampus
nTPM: 19.7
Samples: 4

Max nTPM: 28.8
Min nTPM: 14.3
Sample A Female 17.1
Sample B Female 14.3
Sample C Male 18.5
Sample D Male 28.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 447.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 300.8
Samples: 4

Max nTPM: 315.5
Min nTPM: 285.0
Sample A Male 285.0
Sample B Male 305.3
Sample C Female 315.5
Sample D Female 297.5
Hippocampal formation
nTPM: 447.9
Samples: 4

Max nTPM: 478.4
Min nTPM: 412.0
Sample A Male 433.8
Sample B Male 467.4
Sample C Female 478.4
Sample D Female 412.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.6
71493117 Antisense, RP_050913_02_B11, Mouse strain C57BL/6J (56 days, male) 18.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.