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FAM131A
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:42.8 nTPM
HPA:42.8 nTPM
GTEx:56.0 nTPM
FANTOM5:47.4 Scaled Tags Per Million
Pig:10.5 nTPM
Mouse:287.8 nTPM
Allen mouse:14.3 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 42.8
Sample id Sample description nTPM
Amygdala
nTPM: 31.7
1987 Female, age 91, left hemisphere 41.9
2517 Female, age 94, left hemisphere 39.9
2514 Male, age 75, right hemisphere 28.4
2814 Male, age 76, right hemisphere 25.3
2695 Female, age 67, right hemisphere 22.7
Basal amygdala
nTPM: 40.6
2243 Female, age 91, right hemisphere 57.5
2685 Female, age 94, left hemisphere 49.7
2110 Male, age 80, left hemisphere 42.3
2609 Male, age 75, right hemisphere 35.1
2827 Female, age 67, right hemisphere 32.1
1955 Male, age 76, both hemispheres 27.2
Central amygdala
nTPM: 33.4
2826 Female, age 94, left hemisphere 42.0
2239 Male, age 80, left hemisphere 40.1
2515 Male, age 75, right hemisphere 33.9
1905 Male, age 76, both hemispheres 25.6
2701 Female, age 91, right hemisphere 25.2
Corticomedial amygdala
nTPM: 40.9
2829 Male, age 80, left hemisphere 58.0
2242 Female, age 91, right hemisphere 56.6
2429 Female, age 94, left hemisphere 38.4
2535 Female, age 67, right hemisphere 34.5
2428 Male, age 75, right hemisphere 33.7
2240 Male, age 76, both hemispheres 23.8
Lateral amygdala
nTPM: 33.7
2534 Female, age 94, left hemisphere 48.5
2256 Male, age 80, left hemisphere 34.0
2516 Male, age 75, right hemisphere 32.5
2255 Female, age 91, right hemisphere 31.8
2830 Female, age 67, right hemisphere 29.0
1883 Male, age 76, both hemispheres 26.4
Stria terminalis, bed nucleus
nTPM: 42.8
1974 Female, age 91, both hemispheres 52.7
2486 Female, age 94, both hemispheres 50.0
2201 Male, age 74, unknown 25.7

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 56.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 56.0
Samples: 152

Max nTPM: 143.9
Min nTPM: 13.9
Std nTPM: 25.0
Median nTPM: 50.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 143.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 134.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 131.4
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 116.2
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 115.6
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 112.7
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 110.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 102.0
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 100.2
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 94.3
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 93.1
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 92.1
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 92.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 91.4
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 90.3
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 90.0
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 88.3
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 87.8
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 86.7
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 84.8
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 82.6
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 81.6
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 81.5
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 81.4
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 81.3
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 79.9
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 79.8
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 79.0
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 78.2
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 78.0
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 77.3
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 77.2
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 77.0
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 75.7
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 74.7
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 74.6
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 74.2
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 73.6
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 73.4
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 71.5
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 69.0
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 69.0
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 68.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 67.8
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 66.4
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 66.3
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 66.2
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 65.6
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 64.7
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 64.3
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 64.3
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 64.3
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 64.0
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 63.2
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 63.2
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 61.5
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 60.5
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 60.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 59.6
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 58.5
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 57.8
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 57.3
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 57.1
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 56.8
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 56.5
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 55.2
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 54.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 54.7
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 54.6
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 54.5
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 54.3
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 53.2
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 52.8
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 52.2
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 51.9
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 50.6
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 50.5
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 49.8
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 48.9
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 47.9
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 47.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 47.4
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 47.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 46.8
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 46.4
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 45.9
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 44.9
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 44.2
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 43.8
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 43.6
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 42.3
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 42.2
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 42.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 42.0
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 41.1
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 41.0
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 40.8
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 40.3
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 40.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 40.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 39.4
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 39.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 39.2
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 38.9
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 38.4
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 38.3
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 38.0
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 37.9
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 36.9
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 36.8
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 36.7
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 36.6
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 36.3
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 36.2
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 35.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 35.8
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 35.7
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 35.0
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 34.9
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 34.6
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 34.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 34.4
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 34.2
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 33.8
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 33.7
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 33.6
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 33.6
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 32.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 32.5
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 32.4
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 32.0
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 31.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 31.7
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 31.7
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 31.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 31.5
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 31.2
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 31.1
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 30.5
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 30.3
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 30.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 28.8
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 28.6
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 28.1
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 27.6
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 27.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 27.5
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 21.3
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 19.1
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 18.5
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 17.6
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 13.9
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 47.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 47.4
FF:10151-102I7 76 years, female 47.4

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 10.5
Pig sample Sample description nTPM
Amygdala
nTPM: 10.6
Samples: 4

Max nTPM: 15.9
Min nTPM: 6.3
Sample A Female 15.9
Sample B Female 6.3
Sample C Male 8.7
Sample D Male 11.3

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 287.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 287.8
Samples: 4

Max nTPM: 326.0
Min nTPM: 253.4
Sample A Male 299.2
Sample B Male 326.0
Sample C Female 253.4
Sample D Female 272.5

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 14.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 14.3
71493117 Antisense, RP_050913_02_B11, Mouse strain C57BL/6J (56 days, male) 14.3

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