HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.6 nTPM
HPA:51.6 nTPM
GTEx:34.4 nTPM
FANTOM5:11.0 Scaled Tags Per Million
Pig:56.4 nTPM
Mouse:7.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045617
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.6
Sample id Sample description nTPM
Hippocampus
nTPM: 50.1
2529 Female, age 94, left hemisphere 51.1
1911 Female, age 85, right hemisphere 50.6
1855 Male, age 76, left hemisphere 50.5
2621 Female, age 67, right hemisphere 50.2
1898 Male, age 80, left hemisphere 49.5
2148 Female, age 91, left hemisphere 49.0
Dentate gyrus
nTPM: 49.9
2010 Male, age 76, both hemispheres 53.9
2530 Female, age 94, left hemisphere 52.1
2528 Male, age 74, both hemispheres 49.9
2246 Female, age 85, both hemispheres 49.3
2531 Female, age 67, both hemispheres 47.5
1927 Female, age 91, both hemispheres 46.6
Entorhinal gyrus
nTPM: 49.0
2764 Male, age 80, right hemisphere 50.4
1938 Female, age 85, left hemisphere 49.1
1787 Male, age 76, left hemisphere 49.0
2117 Female, age 91, right hemisphere 48.8
2686 Male, age 75, right hemisphere 48.8
2613 Female, age 94, left hemisphere 47.9
Hippocampus, CA1
nTPM: 49.9
2082 Female, age 91, right hemisphere 53.9
1873 Female, age 85, both hemispheres 49.8
2045 Male, age 76, both hemispheres 49.6
2527 Male, age 74, both hemispheres 48.8
2749 Male, age 80, left hemisphere 47.6
Hippocampus, CA2
nTPM: 51.6
2249 Male, age 74, both hemispheres 58.7
1940 Female, age 85, left hemisphere 54.2
2113 Female, age 91, right hemisphere 51.0
2437 Female, age 94, left hemisphere 50.6
1963 Male, age 80, left hemisphere 47.8
1892 Male, age 76, both hemispheres 47.5
Hippocampus, CA3
nTPM: 49.5
2436 Male, age 74, both hemispheres 51.1
1891 Female, age 85, both hemispheres 50.4
1867 Male, age 76, both hemispheres 49.7
2620 Female, age 94, left hemisphere 49.1
2861 Female, age 67, both hemispheres 48.8
2137 Male, age 80, left hemisphere 47.7
Parahippocampal cortex
nTPM: 49.0
2018 Male, age 76, both hemispheres 50.5
2532 Female, age 72, left hemisphere 50.5
1850 Male, age 80, both hemispheres 49.3
1990 Female, age 91, right hemisphere 49.3
2692 Male, age 74, both hemispheres 49.3
2622 Female, age 67, right hemisphere 49.1
1933 Female, age 85, both hemispheres 48.5
2250 Female, age 67, right hemisphere 48.1
2693 Female, age 94, both hemispheres 47.8
2245 Female, age 91, both hemispheres 47.6
Perirhinal gyrus
nTPM: 48.4
2848 Male, age 76, right hemisphere 49.0
1794 Male, age 80, right hemisphere 48.4
1841 Female, age 85, right hemisphere 48.4
2521 Female, age 94, right hemisphere 48.3
1847 Female, age 91, left hemisphere 48.0
Subiculum
nTPM: 50.6
2042 Male, age 76, both hemispheres 53.6
1901 Male, age 80, both hemispheres 51.0
1977 Female, age 85, both hemispheres 50.4
2438 Female, age 94, left hemisphere 49.9
2619 Male, age 74, both hemispheres 49.4
2729 Female, age 91, right hemisphere 49.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.4
Samples: 197

Max nTPM: 136.6
Min nTPM: 5.4
Std nTPM: 18.4
Median nTPM: 31.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 136.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 117.6
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 91.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 86.4
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 79.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 78.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 74.9
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 73.8
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 72.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 67.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 67.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.0
FF:10153-102I9 76 years, female 11.6
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.4
Samples: 4

Max nTPM: 65.4
Min nTPM: 41.4
Sample A Female 65.2
Sample B Female 53.6
Sample C Male 41.4
Sample D Male 65.4
Entorhinal cortex
nTPM: 28.1
Samples: 4

Max nTPM: 31.3
Min nTPM: 23.6
Sample A Female 31.2
Sample B Female 26.4
Sample C Male 31.3
Sample D Male 23.6
Subiculum
nTPM: 29.7
Samples: 4

Max nTPM: 34.8
Min nTPM: 26.6
Sample A Female 34.8
Sample B Female 26.6
Sample C Male 27.7
Sample D Male 29.8
Ventral hippocampus
nTPM: 44.9
Samples: 4

Max nTPM: 55.3
Min nTPM: 32.1
Sample A Female 46.4
Sample B Female 32.1
Sample C Male 45.6
Sample D Male 55.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.1
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.5
Sample A Male 2.5
Sample B Male 2.8
Sample C Female 3.7
Sample D Female 3.4
Hippocampal formation
nTPM: 7.1
Samples: 4

Max nTPM: 9.0
Min nTPM: 5.6
Sample A Male 7.2
Sample B Male 6.4
Sample C Female 5.6
Sample D Female 9.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
73513654 Antisense, RP_051121_02_E01, Mouse strain C57BL/6J (56 days, male) 0.1

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