HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:36.3 nTPM
HPA:36.3 nTPM
GTEx:27.7 nTPM
FANTOM5:33.5 Scaled Tags Per Million
Pig:5.0 nTPM
Mouse:8.4 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.3
Sample id Sample description nTPM
Hippocampus
nTPM: 35.7
1911 Female, age 85, right hemisphere 39.7
2148 Female, age 91, left hemisphere 37.3
2529 Female, age 94, left hemisphere 36.5
1898 Male, age 80, left hemisphere 34.6
1855 Male, age 76, left hemisphere 33.5
2621 Female, age 67, right hemisphere 32.7
Dentate gyrus
nTPM: 35.8
2528 Male, age 74, both hemispheres 44.8
2246 Female, age 85, both hemispheres 36.9
2530 Female, age 94, left hemisphere 35.0
1927 Female, age 91, both hemispheres 32.7
2010 Male, age 76, both hemispheres 32.6
2531 Female, age 67, both hemispheres 32.4
Entorhinal gyrus
nTPM: 34.2
2117 Female, age 91, right hemisphere 38.4
1787 Male, age 76, left hemisphere 35.5
1938 Female, age 85, left hemisphere 34.0
2686 Male, age 75, right hemisphere 33.0
2613 Female, age 94, left hemisphere 32.2
2764 Male, age 80, right hemisphere 32.1
Hippocampus, CA1
nTPM: 35.9
2527 Male, age 74, both hemispheres 40.3
2082 Female, age 91, right hemisphere 40.0
1873 Female, age 85, both hemispheres 38.9
2045 Male, age 76, both hemispheres 32.5
2749 Male, age 80, left hemisphere 27.9
Hippocampus, CA2
nTPM: 36.3
2249 Male, age 74, both hemispheres 40.2
2113 Female, age 91, right hemisphere 39.8
1940 Female, age 85, left hemisphere 39.6
1963 Male, age 80, left hemisphere 34.6
2437 Female, age 94, left hemisphere 33.9
1892 Male, age 76, both hemispheres 29.4
Hippocampus, CA3
nTPM: 34.3
1891 Female, age 85, both hemispheres 38.3
2436 Male, age 74, both hemispheres 37.0
2620 Female, age 94, left hemisphere 36.3
2861 Female, age 67, both hemispheres 35.0
1867 Male, age 76, both hemispheres 29.9
2137 Male, age 80, left hemisphere 29.2
Parahippocampal cortex
nTPM: 32.8
2692 Male, age 74, both hemispheres 37.7
2018 Male, age 76, both hemispheres 34.6
2250 Female, age 67, right hemisphere 33.8
2622 Female, age 67, right hemisphere 33.4
1990 Female, age 91, right hemisphere 33.1
1933 Female, age 85, both hemispheres 32.6
1850 Male, age 80, both hemispheres 31.2
2245 Female, age 91, both hemispheres 31.1
2693 Female, age 94, both hemispheres 31.1
2532 Female, age 72, left hemisphere 29.2
Perirhinal gyrus
nTPM: 31.2
1794 Male, age 80, right hemisphere 32.9
2848 Male, age 76, right hemisphere 31.8
2521 Female, age 94, right hemisphere 30.8
1841 Female, age 85, right hemisphere 30.5
1847 Female, age 91, left hemisphere 30.1
Subiculum
nTPM: 35.1
2729 Female, age 91, right hemisphere 42.3
2619 Male, age 74, both hemispheres 40.8
2042 Male, age 76, both hemispheres 33.9
1901 Male, age 80, both hemispheres 32.7
1977 Female, age 85, both hemispheres 32.2
2438 Female, age 94, left hemisphere 28.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.7
Samples: 197

Max nTPM: 113.8
Min nTPM: 3.7
Std nTPM: 13.7
Median nTPM: 26.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 113.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 77.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 77.0
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 64.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 58.1
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 55.9
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 53.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 52.8
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 52.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 51.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 51.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.5
FF:10153-102I9 76 years, female 36.7
FF:10169-103B7 60 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 4.7
Min nTPM: 3.4
Sample A Female 4.0
Sample B Female 4.7
Sample C Male 4.6
Sample D Male 3.4
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.8
Sample A Female 3.8
Sample B Female 5.9
Sample C Male 5.1
Sample D Male 5.4
Subiculum
nTPM: 5.0
Samples: 4

Max nTPM: 6.3
Min nTPM: 4.3
Sample A Female 4.3
Sample B Female 6.3
Sample C Male 4.3
Sample D Male 5.2
Ventral hippocampus
nTPM: 4.7
Samples: 4

Max nTPM: 5.7
Min nTPM: 3.6
Sample A Female 3.6
Sample B Female 5.7
Sample C Male 5.5
Sample D Male 3.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.0
Samples: 4

Max nTPM: 6.9
Min nTPM: 4.6
Sample A Male 4.6
Sample B Male 6.0
Sample C Female 6.9
Sample D Female 6.4
Hippocampal formation
nTPM: 8.4
Samples: 4

Max nTPM: 9.8
Min nTPM: 6.5
Sample A Male 6.5
Sample B Male 7.5
Sample C Female 9.7
Sample D Female 9.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69170204 Antisense, RP_050321_04_G10, Mouse strain C57BL/6J (56 days, male) 0.7

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