HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:249.9 nTPM
HPA:249.9 nTPM
GTEx:93.2 nTPM
FANTOM5:92.9 Scaled Tags Per Million
Pig:11.9 nTPM
Mouse:109.1 nTPM
Allen mouse:14.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039242Antibody CAB032896
Glial cells LowMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 249.9
Sample id Sample description nTPM
Hippocampus
nTPM: 249.6
1898 Male, age 80, left hemisphere 251.5
2621 Female, age 67, right hemisphere 251.0
1855 Male, age 76, left hemisphere 249.5
1911 Female, age 85, right hemisphere 249.2
2529 Female, age 94, left hemisphere 249.0
2148 Female, age 91, left hemisphere 247.3
Dentate gyrus
nTPM: 248.0
2010 Male, age 76, both hemispheres 252.1
2530 Female, age 94, left hemisphere 251.7
2528 Male, age 74, both hemispheres 247.7
1927 Female, age 91, both hemispheres 246.5
2246 Female, age 85, both hemispheres 246.3
2531 Female, age 67, both hemispheres 243.6
Entorhinal gyrus
nTPM: 246.4
1787 Male, age 76, left hemisphere 249.3
1938 Female, age 85, left hemisphere 248.9
2117 Female, age 91, right hemisphere 248.8
2764 Male, age 80, right hemisphere 245.3
2686 Male, age 75, right hemisphere 243.3
2613 Female, age 94, left hemisphere 242.9
Hippocampus, CA1
nTPM: 248.5
2749 Male, age 80, left hemisphere 253.8
1873 Female, age 85, both hemispheres 248.3
2082 Female, age 91, right hemisphere 247.7
2527 Male, age 74, both hemispheres 246.8
2045 Male, age 76, both hemispheres 245.7
Hippocampus, CA2
nTPM: 249.0
2249 Male, age 74, both hemispheres 255.3
1892 Male, age 76, both hemispheres 250.0
1940 Female, age 85, left hemisphere 250.0
1963 Male, age 80, left hemisphere 249.5
2113 Female, age 91, right hemisphere 245.9
2437 Female, age 94, left hemisphere 243.6
Hippocampus, CA3
nTPM: 247.9
2137 Male, age 80, left hemisphere 252.2
1891 Female, age 85, both hemispheres 249.8
1867 Male, age 76, both hemispheres 249.7
2436 Male, age 74, both hemispheres 249.6
2620 Female, age 94, left hemisphere 245.9
2861 Female, age 67, both hemispheres 240.3
Parahippocampal cortex
nTPM: 248.3
2250 Female, age 67, right hemisphere 252.6
2245 Female, age 91, both hemispheres 252.3
2018 Male, age 76, both hemispheres 250.7
2692 Male, age 74, both hemispheres 250.5
1933 Female, age 85, both hemispheres 249.3
1850 Male, age 80, both hemispheres 248.1
2532 Female, age 72, left hemisphere 247.2
1990 Female, age 91, right hemisphere 246.0
2622 Female, age 67, right hemisphere 244.9
2693 Female, age 94, both hemispheres 241.9
Perirhinal gyrus
nTPM: 249.9
1841 Female, age 85, right hemisphere 254.5
1794 Male, age 80, right hemisphere 252.6
1847 Female, age 91, left hemisphere 252.6
2848 Male, age 76, right hemisphere 247.0
2521 Female, age 94, right hemisphere 242.8
Subiculum
nTPM: 247.6
2042 Male, age 76, both hemispheres 253.6
1977 Female, age 85, both hemispheres 249.2
1901 Male, age 80, both hemispheres 248.4
2619 Male, age 74, both hemispheres 247.9
2729 Female, age 91, right hemisphere 243.8
2438 Female, age 94, left hemisphere 242.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.2
Samples: 197

Max nTPM: 177.7
Min nTPM: 49.9
Std nTPM: 23.1
Median nTPM: 87.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 177.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 169.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 167.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 160.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 158.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 154.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 153.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 152.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 152.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 149.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 148.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 92.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 92.9
FF:10153-102I9 76 years, female 97.9
FF:10169-103B7 60 years, female 87.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 10.3
Min nTPM: 1.8
Sample A Female 1.8
Sample B Female 6.7
Sample C Male 3.9
Sample D Male 10.3
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 20.1
Min nTPM: 6.5
Sample A Female 6.5
Sample B Female 12.6
Sample C Male 8.4
Sample D Male 20.1
Subiculum
nTPM: 8.5
Samples: 4

Max nTPM: 11.8
Min nTPM: 3.1
Sample A Female 3.1
Sample B Female 11.8
Sample C Male 9.2
Sample D Male 9.7
Ventral hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 11.3
Min nTPM: 1.0
Sample A Female 8.1
Sample B Female 11.3
Sample C Male 1.0
Sample D Male 2.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 109.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.1
Samples: 4

Max nTPM: 104.8
Min nTPM: 85.4
Sample A Male 85.4
Sample B Male 94.1
Sample C Female 104.8
Sample D Female 88.0
Hippocampal formation
nTPM: 109.1
Samples: 4

Max nTPM: 131.6
Min nTPM: 95.5
Sample A Male 107.5
Sample B Male 95.5
Sample C Female 131.6
Sample D Female 101.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.8
68910955 Antisense, RP_041208_02_A09, Mouse strain C57BL/6J (56 days, male) 14.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.