HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:7.6 nTPM
HPA:7.6 nTPM
GTEx:95.9 nTPM
FANTOM5:69.1 Scaled Tags Per Million
Pig:61.7 nTPM
Mouse:64.6 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049250
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.6
Sample id Sample description nTPM
Hippocampus
nTPM: 6.9
2529 Female, age 94, left hemisphere 8.0
1911 Female, age 85, right hemisphere 7.4
1898 Male, age 80, left hemisphere 7.1
2621 Female, age 67, right hemisphere 6.7
2148 Female, age 91, left hemisphere 6.1
1855 Male, age 76, left hemisphere 5.8
Dentate gyrus
nTPM: 6.9
2246 Female, age 85, both hemispheres 7.5
2528 Male, age 74, both hemispheres 7.0
2531 Female, age 67, both hemispheres 6.9
1927 Female, age 91, both hemispheres 6.8
2530 Female, age 94, left hemisphere 6.8
2010 Male, age 76, both hemispheres 6.2
Entorhinal gyrus
nTPM: 6.4
1787 Male, age 76, left hemisphere 7.0
2686 Male, age 75, right hemisphere 6.8
2764 Male, age 80, right hemisphere 6.6
2117 Female, age 91, right hemisphere 6.4
1938 Female, age 85, left hemisphere 6.0
2613 Female, age 94, left hemisphere 5.3
Hippocampus, CA1
nTPM: 7.6
2045 Male, age 76, both hemispheres 8.6
1873 Female, age 85, both hemispheres 7.7
2527 Male, age 74, both hemispheres 7.6
2082 Female, age 91, right hemisphere 7.5
2749 Male, age 80, left hemisphere 6.8
Hippocampus, CA2
nTPM: 6.5
1940 Female, age 85, left hemisphere 7.3
1892 Male, age 76, both hemispheres 6.9
2113 Female, age 91, right hemisphere 6.9
2249 Male, age 74, both hemispheres 6.3
2437 Female, age 94, left hemisphere 5.8
1963 Male, age 80, left hemisphere 5.7
Hippocampus, CA3
nTPM: 6.4
2861 Female, age 67, both hemispheres 7.8
2620 Female, age 94, left hemisphere 7.3
2137 Male, age 80, left hemisphere 7.2
1891 Female, age 85, both hemispheres 6.7
1867 Male, age 76, both hemispheres 4.8
2436 Male, age 74, both hemispheres 4.7
Parahippocampal cortex
nTPM: 6.2
2532 Female, age 72, left hemisphere 6.7
2622 Female, age 67, right hemisphere 6.7
2692 Male, age 74, both hemispheres 6.7
2245 Female, age 91, both hemispheres 6.3
2250 Female, age 67, right hemisphere 6.2
1990 Female, age 91, right hemisphere 6.1
2693 Female, age 94, both hemispheres 6.0
2018 Male, age 76, both hemispheres 5.9
1933 Female, age 85, both hemispheres 5.7
1850 Male, age 80, both hemispheres 5.4
Perirhinal gyrus
nTPM: 6.1
1794 Male, age 80, right hemisphere 6.6
2521 Female, age 94, right hemisphere 6.5
2848 Male, age 76, right hemisphere 6.5
1847 Female, age 91, left hemisphere 5.8
1841 Female, age 85, right hemisphere 5.2
Subiculum
nTPM: 6.3
2729 Female, age 91, right hemisphere 7.5
2619 Male, age 74, both hemispheres 7.1
1901 Male, age 80, both hemispheres 5.9
1977 Female, age 85, both hemispheres 5.9
2438 Female, age 94, left hemisphere 5.8
2042 Male, age 76, both hemispheres 5.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 95.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.9
Samples: 197

Max nTPM: 165.4
Min nTPM: 59.7
Std nTPM: 19.7
Median nTPM: 93.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 165.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 163.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 163.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 153.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 151.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 147.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 146.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 145.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 142.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 141.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 136.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.1
FF:10153-102I9 76 years, female 78.6
FF:10169-103B7 60 years, female 59.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 61.7
Samples: 4

Max nTPM: 79.7
Min nTPM: 45.3
Sample A Female 79.7
Sample B Female 57.7
Sample C Male 64.0
Sample D Male 45.3
Entorhinal cortex
nTPM: 54.8
Samples: 4

Max nTPM: 65.8
Min nTPM: 43.5
Sample A Female 50.0
Sample B Female 59.8
Sample C Male 65.8
Sample D Male 43.5
Subiculum
nTPM: 52.6
Samples: 4

Max nTPM: 66.6
Min nTPM: 43.6
Sample A Female 66.6
Sample B Female 50.7
Sample C Male 49.5
Sample D Male 43.6
Ventral hippocampus
nTPM: 58.6
Samples: 4

Max nTPM: 78.7
Min nTPM: 44.4
Sample A Female 51.9
Sample B Female 44.4
Sample C Male 78.7
Sample D Male 59.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.9
Samples: 4

Max nTPM: 66.2
Min nTPM: 57.4
Sample A Male 64.3
Sample B Male 57.4
Sample C Female 66.2
Sample D Female 59.7
Hippocampal formation
nTPM: 64.6
Samples: 4

Max nTPM: 73.3
Min nTPM: 60.6
Sample A Male 73.3
Sample B Male 61.9
Sample C Female 60.6
Sample D Female 62.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
69671953 Antisense, RP_050428_02_F10, Mouse strain C57BL/6J (56 days, male) 2.3

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