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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:125.7 nTPM
FANTOM5:116.2 Scaled Tags Per Million
Pig:163.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA006790
Glial cells Medium
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 125.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 125.7
Samples: 246

Max nTPM: 256.0
Min nTPM: 56.5
Std nTPM: 29.8
Median nTPM: 123.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 256.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 253.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 243.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 212.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 206.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 203.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 201.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 198.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 191.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 181.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 174.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 173.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 172.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 171.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 167.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 166.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 166.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 161.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 160.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 160.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 159.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 159.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 158.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 158.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 158.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 157.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 155.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 154.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 154.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 153.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 153.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 152.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 152.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 152.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 151.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 151.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 150.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 150.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 149.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 148.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 147.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 147.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 147.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 146.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 145.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 145.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 144.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 144.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 144.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 143.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 143.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 143.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 143.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 143.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 142.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 142.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 142.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 141.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 141.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 141.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 141.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 140.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 140.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 140.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 140.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 140.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 140.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 139.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 139.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 138.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 137.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 137.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 136.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 136.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 135.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 135.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 135.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 135.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 134.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 134.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 134.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 133.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 133.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 133.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 133.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 132.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 132.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 132.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 131.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 131.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 131.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 131.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 131.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 130.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 130.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 130.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 130.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 129.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 129.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 129.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 128.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 128.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 128.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 128.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 127.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 127.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 127.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 127.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 127.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 127.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 126.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 126.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 126.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 125.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 124.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 124.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 124.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 124.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 124.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 124.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 123.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 123.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 123.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 123.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 123.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 122.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 122.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 122.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 121.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 121.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 121.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 121.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 121.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 120.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 120.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 120.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 120.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 120.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 120.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 119.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 119.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 119.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 119.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 119.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 119.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 119.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 118.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 118.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 118.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 118.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 118.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 117.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 117.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 117.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 117.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 116.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 116.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 116.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 116.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 115.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 115.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 115.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 114.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 114.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 114.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 114.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 114.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 114.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 114.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 114.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 114.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 113.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 113.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 113.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 113.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 112.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 112.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 112.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 112.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 112.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 112.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 111.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 111.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 110.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 109.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 109.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 108.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 108.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 108.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 108.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 106.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 106.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 105.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 104.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 104.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 104.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 104.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 103.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 103.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 103.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 101.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 101.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 101.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 100.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 100.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 100.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 99.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 98.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 97.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 95.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 95.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 95.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 95.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 95.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 95.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 94.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 94.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 93.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 93.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 92.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 91.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 90.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 89.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 89.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 87.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 87.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 87.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 86.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 86.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 84.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 84.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 83.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 82.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 78.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 78.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 75.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 73.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 73.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 71.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 69.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 69.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 67.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 65.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 65.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 63.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 56.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 116.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 116.2
FF:10164-103B2 76 years, female 116.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 163.0
Pig sample Sample description nTPM
Caudate
nTPM: 163.0
Samples: 4

Max nTPM: 187.3
Min nTPM: 135.2
Sample A Female 135.2
Sample B Female 184.8
Sample C Male 187.3
Sample D Male 144.6

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