HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:101.8 nTPM
HPA:101.8 nTPM
GTEx:113.3 nTPM
FANTOM5:120.0 Scaled Tags Per Million
Pig:209.7 nTPM
Mouse:422.7 nTPM
Allen mouse:18.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059131Antibody CAB009936
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 101.8
Sample id Sample description nTPM
Hippocampus
nTPM: 86.9
1898 Male, age 80, left hemisphere 105.5
1855 Male, age 76, left hemisphere 94.2
2621 Female, age 67, right hemisphere 89.4
2529 Female, age 94, left hemisphere 81.3
2148 Female, age 91, left hemisphere 76.2
1911 Female, age 85, right hemisphere 74.8
Dentate gyrus
nTPM: 88.1
2530 Female, age 94, left hemisphere 102.2
1927 Female, age 91, both hemispheres 98.7
2010 Male, age 76, both hemispheres 94.8
2246 Female, age 85, both hemispheres 83.3
2528 Male, age 74, both hemispheres 79.2
2531 Female, age 67, both hemispheres 70.4
Entorhinal gyrus
nTPM: 85.6
2764 Male, age 80, right hemisphere 101.8
1938 Female, age 85, left hemisphere 90.5
1787 Male, age 76, left hemisphere 89.1
2613 Female, age 94, left hemisphere 85.2
2117 Female, age 91, right hemisphere 78.4
2686 Male, age 75, right hemisphere 68.5
Hippocampus, CA1
nTPM: 99.7
2749 Male, age 80, left hemisphere 149.1
2045 Male, age 76, both hemispheres 95.5
1873 Female, age 85, both hemispheres 90.5
2527 Male, age 74, both hemispheres 84.5
2082 Female, age 91, right hemisphere 78.8
Hippocampus, CA2
nTPM: 91.8
1963 Male, age 80, left hemisphere 115.0
1892 Male, age 76, both hemispheres 110.6
2249 Male, age 74, both hemispheres 87.3
2437 Female, age 94, left hemisphere 85.1
1940 Female, age 85, left hemisphere 78.2
2113 Female, age 91, right hemisphere 74.3
Hippocampus, CA3
nTPM: 91.5
2137 Male, age 80, left hemisphere 119.8
1867 Male, age 76, both hemispheres 102.1
2436 Male, age 74, both hemispheres 92.7
2620 Female, age 94, left hemisphere 83.2
1891 Female, age 85, both hemispheres 77.0
2861 Female, age 67, both hemispheres 74.3
Parahippocampal cortex
nTPM: 84.6
1850 Male, age 80, both hemispheres 103.6
2245 Female, age 91, both hemispheres 94.4
1933 Female, age 85, both hemispheres 90.9
2250 Female, age 67, right hemisphere 90.0
2018 Male, age 76, both hemispheres 89.1
1990 Female, age 91, right hemisphere 88.6
2532 Female, age 72, left hemisphere 83.4
2693 Female, age 94, both hemispheres 78.3
2622 Female, age 67, right hemisphere 65.5
2692 Male, age 74, both hemispheres 62.7
Perirhinal gyrus
nTPM: 101.8
1847 Female, age 91, left hemisphere 114.9
1794 Male, age 80, right hemisphere 105.8
1841 Female, age 85, right hemisphere 103.1
2521 Female, age 94, right hemisphere 94.1
2848 Male, age 76, right hemisphere 91.1
Subiculum
nTPM: 81.1
1977 Female, age 85, both hemispheres 91.7
1901 Male, age 80, both hemispheres 91.1
2042 Male, age 76, both hemispheres 80.4
2619 Male, age 74, both hemispheres 78.8
2438 Female, age 94, left hemisphere 76.1
2729 Female, age 91, right hemisphere 68.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 113.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 113.3
Samples: 197

Max nTPM: 214.6
Min nTPM: 44.6
Std nTPM: 31.8
Median nTPM: 105.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 214.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 198.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 194.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 192.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 189.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 184.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 180.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 178.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 175.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 170.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 170.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 120.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 120.0
FF:10169-103B7 60 years, female 128.7
FF:10153-102I9 76 years, female 111.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 209.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 199.2
Samples: 4

Max nTPM: 250.5
Min nTPM: 142.4
Sample A Female 250.5
Sample B Female 192.4
Sample C Male 211.3
Sample D Male 142.4
Entorhinal cortex
nTPM: 209.7
Samples: 4

Max nTPM: 227.0
Min nTPM: 192.4
Sample A Female 227.0
Sample B Female 206.9
Sample C Male 212.4
Sample D Male 192.4
Subiculum
nTPM: 207.9
Samples: 4

Max nTPM: 262.9
Min nTPM: 181.4
Sample A Female 262.9
Sample B Female 181.4
Sample C Male 194.7
Sample D Male 192.5
Ventral hippocampus
nTPM: 183.4
Samples: 4

Max nTPM: 212.9
Min nTPM: 136.4
Sample A Female 212.9
Sample B Female 136.4
Sample C Male 200.8
Sample D Male 183.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 422.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 409.1
Samples: 4

Max nTPM: 438.4
Min nTPM: 387.0
Sample A Male 392.6
Sample B Male 438.4
Sample C Female 387.0
Sample D Female 418.4
Hippocampal formation
nTPM: 422.7
Samples: 4

Max nTPM: 464.4
Min nTPM: 370.1
Sample A Male 432.0
Sample B Male 424.3
Sample C Female 464.4
Sample D Female 370.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.9
74047909 Antisense, RP_051214_02_C06, Mouse strain C57BL/6J (56 days, male) 20.9
532748 Antisense, RP_040825_02_A11, Mouse strain C57BL/6J (56 days, male) 16.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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