HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:44.7 nTPM
HPA:44.7 nTPM
GTEx:31.4 nTPM
FANTOM5:131.9 Scaled Tags Per Million
Pig:76.1 nTPM
Mouse:48.9 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.7
Sample id Sample description nTPM
Hippocampus
nTPM: 31.7
2529 Female, age 94, left hemisphere 40.1
2148 Female, age 91, left hemisphere 35.2
1855 Male, age 76, left hemisphere 32.0
2621 Female, age 67, right hemisphere 29.7
1898 Male, age 80, left hemisphere 29.4
1911 Female, age 85, right hemisphere 23.9
Dentate gyrus
nTPM: 27.5
2528 Male, age 74, both hemispheres 36.5
2530 Female, age 94, left hemisphere 34.8
2531 Female, age 67, both hemispheres 30.1
2246 Female, age 85, both hemispheres 28.1
2010 Male, age 76, both hemispheres 19.9
1927 Female, age 91, both hemispheres 15.8
Entorhinal gyrus
nTPM: 38.1
1787 Male, age 76, left hemisphere 44.8
2613 Female, age 94, left hemisphere 43.1
2764 Male, age 80, right hemisphere 40.9
1938 Female, age 85, left hemisphere 34.9
2686 Male, age 75, right hemisphere 33.2
2117 Female, age 91, right hemisphere 31.5
Hippocampus, CA1
nTPM: 25.4
2082 Female, age 91, right hemisphere 31.1
2527 Male, age 74, both hemispheres 30.6
1873 Female, age 85, both hemispheres 23.9
2045 Male, age 76, both hemispheres 21.2
2749 Male, age 80, left hemisphere 20.3
Hippocampus, CA2
nTPM: 25.2
2113 Female, age 91, right hemisphere 32.1
2437 Female, age 94, left hemisphere 29.6
1963 Male, age 80, left hemisphere 29.1
2249 Male, age 74, both hemispheres 24.6
1940 Female, age 85, left hemisphere 24.3
1892 Male, age 76, both hemispheres 11.5
Hippocampus, CA3
nTPM: 26.3
2861 Female, age 67, both hemispheres 42.2
2620 Female, age 94, left hemisphere 40.3
1891 Female, age 85, both hemispheres 21.2
2137 Male, age 80, left hemisphere 21.1
2436 Male, age 74, both hemispheres 19.9
1867 Male, age 76, both hemispheres 12.8
Parahippocampal cortex
nTPM: 34.6
2622 Female, age 67, right hemisphere 48.4
1850 Male, age 80, both hemispheres 37.7
2018 Male, age 76, both hemispheres 36.6
2692 Male, age 74, both hemispheres 36.1
2532 Female, age 72, left hemisphere 35.2
2245 Female, age 91, both hemispheres 32.9
1933 Female, age 85, both hemispheres 32.7
2693 Female, age 94, both hemispheres 29.8
2250 Female, age 67, right hemisphere 28.5
1990 Female, age 91, right hemisphere 28.3
Perirhinal gyrus
nTPM: 44.7
2848 Male, age 76, right hemisphere 63.5
1794 Male, age 80, right hemisphere 48.3
1841 Female, age 85, right hemisphere 45.0
1847 Female, age 91, left hemisphere 34.8
2521 Female, age 94, right hemisphere 31.7
Subiculum
nTPM: 25.4
2619 Male, age 74, both hemispheres 34.9
2729 Female, age 91, right hemisphere 34.1
1977 Female, age 85, both hemispheres 25.3
2438 Female, age 94, left hemisphere 24.0
2042 Male, age 76, both hemispheres 18.5
1901 Male, age 80, both hemispheres 15.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.4
Samples: 197

Max nTPM: 72.4
Min nTPM: 8.9
Std nTPM: 11.0
Median nTPM: 30.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 72.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 68.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 66.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 63.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 58.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 58.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 56.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 54.1
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 53.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 52.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 51.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 131.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 131.9
FF:10153-102I9 76 years, female 149.7
FF:10169-103B7 60 years, female 114.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.9
Samples: 4

Max nTPM: 50.2
Min nTPM: 29.1
Sample A Female 50.2
Sample B Female 45.6
Sample C Male 42.6
Sample D Male 29.1
Entorhinal cortex
nTPM: 76.1
Samples: 4

Max nTPM: 90.6
Min nTPM: 63.2
Sample A Female 90.6
Sample B Female 63.2
Sample C Male 83.2
Sample D Male 67.4
Subiculum
nTPM: 57.3
Samples: 4

Max nTPM: 65.3
Min nTPM: 53.4
Sample A Female 65.3
Sample B Female 53.4
Sample C Male 56.1
Sample D Male 54.3
Ventral hippocampus
nTPM: 63.6
Samples: 4

Max nTPM: 84.3
Min nTPM: 47.8
Sample A Female 69.9
Sample B Female 47.8
Sample C Male 84.3
Sample D Male 52.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.0
Samples: 4

Max nTPM: 55.5
Min nTPM: 41.5
Sample A Male 52.5
Sample B Male 55.5
Sample C Female 41.5
Sample D Female 46.3
Hippocampal formation
nTPM: 31.8
Samples: 4

Max nTPM: 37.3
Min nTPM: 25.7
Sample A Male 37.3
Sample B Male 32.9
Sample C Female 25.7
Sample D Female 31.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
721 Antisense, RP_Baylor_102760, Mouse strain C57BL/6J (56 days, male) 5.3
720 Antisense, RP_Baylor_102760, Mouse strain C57BL/6J (56 days, male) 5.0

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