HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:113.4 nTPM
HPA:113.4 nTPM
GTEx:131.3 nTPM
FANTOM5:55.8 Scaled Tags Per Million
Pig:45.2 nTPM
Mouse:107.6 nTPM
Allen mouse:13.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031821
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 113.4
Sample id Sample description nTPM
Hippocampus
nTPM: 110.9
1898 Male, age 80, left hemisphere 120.4
2529 Female, age 94, left hemisphere 114.8
2148 Female, age 91, left hemisphere 108.9
2621 Female, age 67, right hemisphere 107.6
1855 Male, age 76, left hemisphere 107.3
1911 Female, age 85, right hemisphere 106.4
Dentate gyrus
nTPM: 110.9
2530 Female, age 94, left hemisphere 119.4
2528 Male, age 74, both hemispheres 112.4
2010 Male, age 76, both hemispheres 112.0
1927 Female, age 91, both hemispheres 111.2
2246 Female, age 85, both hemispheres 105.7
2531 Female, age 67, both hemispheres 104.6
Entorhinal gyrus
nTPM: 111.5
2764 Male, age 80, right hemisphere 118.2
2117 Female, age 91, right hemisphere 112.8
1787 Male, age 76, left hemisphere 112.4
1938 Female, age 85, left hemisphere 112.2
2613 Female, age 94, left hemisphere 108.0
2686 Male, age 75, right hemisphere 105.6
Hippocampus, CA1
nTPM: 113.4
2749 Male, age 80, left hemisphere 128.4
1873 Female, age 85, both hemispheres 113.3
2527 Male, age 74, both hemispheres 113.2
2082 Female, age 91, right hemisphere 108.4
2045 Male, age 76, both hemispheres 103.9
Hippocampus, CA2
nTPM: 111.7
1963 Male, age 80, left hemisphere 117.3
2249 Male, age 74, both hemispheres 117.1
1892 Male, age 76, both hemispheres 112.0
2437 Female, age 94, left hemisphere 109.7
1940 Female, age 85, left hemisphere 107.5
2113 Female, age 91, right hemisphere 106.6
Hippocampus, CA3
nTPM: 112.1
2436 Male, age 74, both hemispheres 123.1
2137 Male, age 80, left hemisphere 114.4
2620 Female, age 94, left hemisphere 111.4
1867 Male, age 76, both hemispheres 110.6
2861 Female, age 67, both hemispheres 106.8
1891 Female, age 85, both hemispheres 105.9
Parahippocampal cortex
nTPM: 108.4
2245 Female, age 91, both hemispheres 115.3
2250 Female, age 67, right hemisphere 114.7
1990 Female, age 91, right hemisphere 112.3
1933 Female, age 85, both hemispheres 111.5
1850 Male, age 80, both hemispheres 109.4
2622 Female, age 67, right hemisphere 107.0
2018 Male, age 76, both hemispheres 105.3
2692 Male, age 74, both hemispheres 105.3
2532 Female, age 72, left hemisphere 103.7
2693 Female, age 94, both hemispheres 99.2
Perirhinal gyrus
nTPM: 111.7
1794 Male, age 80, right hemisphere 120.0
1847 Female, age 91, left hemisphere 117.9
1841 Female, age 85, right hemisphere 110.5
2521 Female, age 94, right hemisphere 106.6
2848 Male, age 76, right hemisphere 103.3
Subiculum
nTPM: 108.1
2619 Male, age 74, both hemispheres 114.9
1977 Female, age 85, both hemispheres 112.1
1901 Male, age 80, both hemispheres 111.5
2729 Female, age 91, right hemisphere 106.3
2042 Male, age 76, both hemispheres 105.3
2438 Female, age 94, left hemisphere 98.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 131.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 131.3
Samples: 197

Max nTPM: 267.9
Min nTPM: 38.2
Std nTPM: 36.6
Median nTPM: 127.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 267.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 260.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 256.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 248.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 243.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 241.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 234.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 211.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 208.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 203.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 201.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.8
FF:10169-103B7 60 years, female 66.9
FF:10153-102I9 76 years, female 44.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.2
Samples: 4

Max nTPM: 61.8
Min nTPM: 33.1
Sample A Female 61.8
Sample B Female 43.2
Sample C Male 42.8
Sample D Male 33.1
Entorhinal cortex
nTPM: 38.5
Samples: 4

Max nTPM: 42.3
Min nTPM: 31.7
Sample A Female 37.9
Sample B Female 42.1
Sample C Male 42.3
Sample D Male 31.7
Subiculum
nTPM: 36.6
Samples: 4

Max nTPM: 50.8
Min nTPM: 30.4
Sample A Female 50.8
Sample B Female 30.9
Sample C Male 34.4
Sample D Male 30.4
Ventral hippocampus
nTPM: 43.0
Samples: 4

Max nTPM: 52.0
Min nTPM: 29.4
Sample A Female 46.5
Sample B Female 29.4
Sample C Male 52.0
Sample D Male 43.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 107.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 107.6
Samples: 4

Max nTPM: 115.6
Min nTPM: 100.2
Sample A Male 100.2
Sample B Male 106.1
Sample C Female 115.6
Sample D Female 108.5
Hippocampal formation
nTPM: 107.4
Samples: 4

Max nTPM: 122.8
Min nTPM: 99.2
Sample A Male 122.8
Sample B Male 99.2
Sample C Female 103.1
Sample D Female 104.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.1
576434 Antisense, RP_040826_01_H10, Mouse strain C57BL/6J (56 days, male) 20.6
81599658 Antisense, RP_071213_04_B03, Mouse strain C57BL/6J (56 days, male) 5.6

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The Human Protein Atlas

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