COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:221.1 nTPM
HPA:69.1 nTPM
GTEx:221.1 nTPM
FANTOM5:268.9 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 69.1
overview
Male, age 54 		Colon sample 67
nTPM: 190.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 123.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 78.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 71
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 95.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 51.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 30.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 37.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 34.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 49.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 44.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 55.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 37
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 221.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 221.1
Samples: 373

Max nTPM: 812.7
Min nTPM: 49.7
Std nTPM: 81.2
Median nTPM: 202.2
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 812.7
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 475.5
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 459.8
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 456.3
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 449.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 440.7
GTEX-183WM-2526-SM-731BP 70-79 years, female 427.5
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 414.5
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 414.2
GTEX-15UF6-2726-SM-7KULY 70-79 years, female 406.3
GTEX-1R9PO-2026-SM-E9J4N 60-69 years, female 404.6
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Colon - Transverse
Average nTPM: 129.8
Samples: 406

Max nTPM: 359.3
Min nTPM: 22.2
Std nTPM: 63.3
Median nTPM: 118.3
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 359.3
GTEX-1NV5F-2226-SM-DTX8O 60-69 years, female 331.0
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 320.1
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 300.8
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 300.0
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 296.7
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 289.8
GTEX-14E1K-1826-SM-793DT 50-59 years, male 289.0
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 288.8
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 284.2
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 273.8
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 268.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 268.9
FF:10014-101C5 62,83,84 years, mixed 268.9

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.