HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:21.5 nTPM
HPA:21.5 nTPM
GTEx:15.9 nTPM
FANTOM5:117.1 Scaled Tags Per Million
Pig:115.4 nTPM
Mouse:44.9 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.5
Sample id Sample description nTPM
Hippocampus
nTPM: 18.9
2621 Female, age 67, right hemisphere 24.9
1898 Male, age 80, left hemisphere 19.6
1855 Male, age 76, left hemisphere 19.0
1911 Female, age 85, right hemisphere 18.8
2148 Female, age 91, left hemisphere 17.1
2529 Female, age 94, left hemisphere 13.8
Dentate gyrus
nTPM: 15.8
2531 Female, age 67, both hemispheres 18.1
1927 Female, age 91, both hemispheres 17.4
2528 Male, age 74, both hemispheres 16.2
2010 Male, age 76, both hemispheres 15.1
2246 Female, age 85, both hemispheres 14.3
2530 Female, age 94, left hemisphere 13.7
Entorhinal gyrus
nTPM: 19.0
2613 Female, age 94, left hemisphere 23.0
1938 Female, age 85, left hemisphere 22.7
2764 Male, age 80, right hemisphere 21.1
2686 Male, age 75, right hemisphere 18.6
1787 Male, age 76, left hemisphere 15.3
2117 Female, age 91, right hemisphere 13.5
Hippocampus, CA1
nTPM: 21.5
2749 Male, age 80, left hemisphere 30.5
2527 Male, age 74, both hemispheres 25.5
1873 Female, age 85, both hemispheres 22.1
2045 Male, age 76, both hemispheres 18.2
2082 Female, age 91, right hemisphere 11.0
Hippocampus, CA2
nTPM: 15.0
1963 Male, age 80, left hemisphere 19.8
2249 Male, age 74, both hemispheres 18.5
1892 Male, age 76, both hemispheres 16.5
2113 Female, age 91, right hemisphere 12.6
2437 Female, age 94, left hemisphere 12.1
1940 Female, age 85, left hemisphere 10.6
Hippocampus, CA3
nTPM: 18.7
2620 Female, age 94, left hemisphere 29.0
2861 Female, age 67, both hemispheres 25.3
2137 Male, age 80, left hemisphere 21.1
1867 Male, age 76, both hemispheres 15.2
1891 Female, age 85, both hemispheres 11.4
2436 Male, age 74, both hemispheres 10.1
Parahippocampal cortex
nTPM: 17.7
2622 Female, age 67, right hemisphere 25.4
2245 Female, age 91, both hemispheres 22.3
2692 Male, age 74, both hemispheres 20.8
2532 Female, age 72, left hemisphere 18.4
2250 Female, age 67, right hemisphere 18.0
1850 Male, age 80, both hemispheres 17.7
1933 Female, age 85, both hemispheres 15.6
1990 Female, age 91, right hemisphere 15.6
2693 Female, age 94, both hemispheres 14.1
2018 Male, age 76, both hemispheres 9.5
Perirhinal gyrus
nTPM: 17.8
2848 Male, age 76, right hemisphere 21.7
1794 Male, age 80, right hemisphere 19.1
1847 Female, age 91, left hemisphere 18.5
1841 Female, age 85, right hemisphere 16.6
2521 Female, age 94, right hemisphere 12.9
Subiculum
nTPM: 14.4
2619 Male, age 74, both hemispheres 23.8
1977 Female, age 85, both hemispheres 15.6
2438 Female, age 94, left hemisphere 14.2
2729 Female, age 91, right hemisphere 13.2
1901 Male, age 80, both hemispheres 11.1
2042 Male, age 76, both hemispheres 8.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 31.5
Min nTPM: 2.6
Std nTPM: 6.5
Median nTPM: 16.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 31.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 29.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 28.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 27.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 27.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 27.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 27.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 27.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 27.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 26.6
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 26.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.1
FF:10153-102I9 76 years, female 134.9
FF:10169-103B7 60 years, female 99.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 115.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 99.7
Samples: 4

Max nTPM: 115.8
Min nTPM: 76.2
Sample A Female 115.8
Sample B Female 108.5
Sample C Male 76.2
Sample D Male 98.3
Entorhinal cortex
nTPM: 73.9
Samples: 4

Max nTPM: 82.4
Min nTPM: 57.4
Sample A Female 82.4
Sample B Female 57.4
Sample C Male 79.3
Sample D Male 76.5
Subiculum
nTPM: 86.6
Samples: 4

Max nTPM: 105.0
Min nTPM: 68.6
Sample A Female 105.0
Sample B Female 72.7
Sample C Male 100.1
Sample D Male 68.6
Ventral hippocampus
nTPM: 115.4
Samples: 4

Max nTPM: 142.9
Min nTPM: 77.0
Sample A Female 105.6
Sample B Female 77.0
Sample C Male 142.9
Sample D Male 136.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.0
Samples: 4

Max nTPM: 38.3
Min nTPM: 35.4
Sample A Male 38.3
Sample B Male 37.3
Sample C Female 35.4
Sample D Female 36.9
Hippocampal formation
nTPM: 44.9
Samples: 4

Max nTPM: 49.7
Min nTPM: 39.1
Sample A Male 42.5
Sample B Male 49.7
Sample C Female 48.3
Sample D Female 39.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
2231 Antisense, RP_Baylor_253910, Mouse strain C57BL/6J (56 days, male) 1.2
2230 Antisense, RP_Baylor_253910, Mouse strain C57BL/6J (56 days, male) 0.4

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