HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.9 nTPM
HPA:20.9 nTPM
GTEx:21.7 nTPM
FANTOM5:39.1 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:20.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046315
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.9
Sample id Sample description nTPM
Hippocampus
nTPM: 20.0
1911 Female, age 85, right hemisphere 21.1
1855 Male, age 76, left hemisphere 20.1
1898 Male, age 80, left hemisphere 20.1
2148 Female, age 91, left hemisphere 20.1
2621 Female, age 67, right hemisphere 19.7
2529 Female, age 94, left hemisphere 19.0
Dentate gyrus
nTPM: 20.7
1927 Female, age 91, both hemispheres 21.7
2010 Male, age 76, both hemispheres 21.1
2246 Female, age 85, both hemispheres 20.8
2528 Male, age 74, both hemispheres 20.4
2530 Female, age 94, left hemisphere 20.4
2531 Female, age 67, both hemispheres 20.0
Entorhinal gyrus
nTPM: 20.1
2686 Male, age 75, right hemisphere 21.5
2613 Female, age 94, left hemisphere 20.7
1938 Female, age 85, left hemisphere 20.5
1787 Male, age 76, left hemisphere 20.1
2764 Male, age 80, right hemisphere 19.0
2117 Female, age 91, right hemisphere 18.5
Hippocampus, CA1
nTPM: 20.6
2045 Male, age 76, both hemispheres 22.2
2749 Male, age 80, left hemisphere 20.7
2527 Male, age 74, both hemispheres 20.2
1873 Female, age 85, both hemispheres 19.9
2082 Female, age 91, right hemisphere 19.8
Hippocampus, CA2
nTPM: 19.8
2249 Male, age 74, both hemispheres 20.5
2113 Female, age 91, right hemisphere 20.2
1892 Male, age 76, both hemispheres 20.0
1940 Female, age 85, left hemisphere 19.7
2437 Female, age 94, left hemisphere 19.7
1963 Male, age 80, left hemisphere 18.8
Hippocampus, CA3
nTPM: 20.9
2620 Female, age 94, left hemisphere 22.2
2137 Male, age 80, left hemisphere 21.3
1867 Male, age 76, both hemispheres 21.1
1891 Female, age 85, both hemispheres 20.7
2861 Female, age 67, both hemispheres 20.7
2436 Male, age 74, both hemispheres 19.2
Parahippocampal cortex
nTPM: 20.9
2532 Female, age 72, left hemisphere 22.8
1990 Female, age 91, right hemisphere 21.9
2693 Female, age 94, both hemispheres 21.5
2692 Male, age 74, both hemispheres 21.4
2018 Male, age 76, both hemispheres 21.3
1850 Male, age 80, both hemispheres 20.9
1933 Female, age 85, both hemispheres 20.7
2245 Female, age 91, both hemispheres 19.9
2250 Female, age 67, right hemisphere 19.3
2622 Female, age 67, right hemisphere 19.0
Perirhinal gyrus
nTPM: 20.5
1841 Female, age 85, right hemisphere 21.9
2521 Female, age 94, right hemisphere 20.7
2848 Male, age 76, right hemisphere 20.3
1794 Male, age 80, right hemisphere 19.9
1847 Female, age 91, left hemisphere 19.5
Subiculum
nTPM: 20.2
1977 Female, age 85, both hemispheres 21.3
2438 Female, age 94, left hemisphere 20.6
2042 Male, age 76, both hemispheres 20.2
1901 Male, age 80, both hemispheres 19.9
2729 Female, age 91, right hemisphere 19.7
2619 Male, age 74, both hemispheres 19.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.7
Samples: 197

Max nTPM: 52.8
Min nTPM: 8.1
Std nTPM: 6.0
Median nTPM: 21.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 52.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 39.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 37.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 37.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 36.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 34.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 33.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 32.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 32.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 31.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 31.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.1
FF:10153-102I9 76 years, female 39.5
FF:10169-103B7 60 years, female 38.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 12.3
Min nTPM: 10.5
Sample A Female 10.5
Sample B Female 12.3
Sample C Male 12.2
Sample D Male 12.2
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 12.1
Min nTPM: 10.9
Sample A Female 10.9
Sample B Female 12.1
Sample C Male 11.5
Sample D Male 11.8
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.6
Sample A Female 9.6
Sample B Female 10.9
Sample C Male 10.8
Sample D Male 10.8
Ventral hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 11.7
Min nTPM: 10.6
Sample A Female 11.6
Sample B Female 11.7
Sample C Male 10.6
Sample D Male 10.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 22.2
Min nTPM: 12.2
Sample A Male 22.2
Sample B Male 16.8
Sample C Female 12.2
Sample D Female 15.9
Hippocampal formation
nTPM: 20.1
Samples: 4

Max nTPM: 23.2
Min nTPM: 17.8
Sample A Male 17.8
Sample B Male 18.9
Sample C Female 23.2
Sample D Female 20.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70305389 Antisense, RP_050609_04_A12, Mouse strain C57BL/6J (56 days, male) 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.