HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:34.3 nTPM
HPA:34.3 nTPM
GTEx:42.5 nTPM
FANTOM5:27.7 Scaled Tags Per Million
Mouse:33.8 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA077250
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.3
Sample id Sample description nTPM
Hippocampus
nTPM: 22.2
2529 Female, age 94, left hemisphere 31.0
1911 Female, age 85, right hemisphere 30.2
2621 Female, age 67, right hemisphere 23.1
1898 Male, age 80, left hemisphere 20.3
1855 Male, age 76, left hemisphere 16.2
2148 Female, age 91, left hemisphere 12.3
Dentate gyrus
nTPM: 18.9
2530 Female, age 94, left hemisphere 35.3
2010 Male, age 76, both hemispheres 22.6
2528 Male, age 74, both hemispheres 19.9
2246 Female, age 85, both hemispheres 17.9
2531 Female, age 67, both hemispheres 9.2
1927 Female, age 91, both hemispheres 8.5
Entorhinal gyrus
nTPM: 30.1
2117 Female, age 91, right hemisphere 52.8
2764 Male, age 80, right hemisphere 43.0
2613 Female, age 94, left hemisphere 25.9
1938 Female, age 85, left hemisphere 21.8
2686 Male, age 75, right hemisphere 18.5
1787 Male, age 76, left hemisphere 18.4
Hippocampus, CA1
nTPM: 13.3
2527 Male, age 74, both hemispheres 20.2
1873 Female, age 85, both hemispheres 15.7
2082 Female, age 91, right hemisphere 15.1
2749 Male, age 80, left hemisphere 13.6
2045 Male, age 76, both hemispheres 2.0
Hippocampus, CA2
nTPM: 20.6
2249 Male, age 74, both hemispheres 30.6
1963 Male, age 80, left hemisphere 25.9
1940 Female, age 85, left hemisphere 24.0
2113 Female, age 91, right hemisphere 18.8
2437 Female, age 94, left hemisphere 17.8
1892 Male, age 76, both hemispheres 6.5
Hippocampus, CA3
nTPM: 12.8
1891 Female, age 85, both hemispheres 33.9
2436 Male, age 74, both hemispheres 11.7
1867 Male, age 76, both hemispheres 11.5
2620 Female, age 94, left hemisphere 8.5
2137 Male, age 80, left hemisphere 5.9
2861 Female, age 67, both hemispheres 5.3
Parahippocampal cortex
nTPM: 18.0
2692 Male, age 74, both hemispheres 31.4
2532 Female, age 72, left hemisphere 27.1
1990 Female, age 91, right hemisphere 26.7
1933 Female, age 85, both hemispheres 19.5
1850 Male, age 80, both hemispheres 18.1
2245 Female, age 91, both hemispheres 16.4
2018 Male, age 76, both hemispheres 14.6
2693 Female, age 94, both hemispheres 10.0
2622 Female, age 67, right hemisphere 8.4
2250 Female, age 67, right hemisphere 8.0
Perirhinal gyrus
nTPM: 10.2
2521 Female, age 94, right hemisphere 14.4
1794 Male, age 80, right hemisphere 13.7
2848 Male, age 76, right hemisphere 11.1
1847 Female, age 91, left hemisphere 7.1
1841 Female, age 85, right hemisphere 4.8
Subiculum
nTPM: 34.3
2042 Male, age 76, both hemispheres 55.9
1901 Male, age 80, both hemispheres 46.0
1977 Female, age 85, both hemispheres 37.0
2619 Male, age 74, both hemispheres 27.8
2729 Female, age 91, right hemisphere 19.8
2438 Female, age 94, left hemisphere 19.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.5
Samples: 197

Max nTPM: 206.9
Min nTPM: 2.5
Std nTPM: 30.6
Median nTPM: 32.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 206.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 140.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 136.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 125.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 124.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 122.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 122.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 121.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 120.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 109.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 105.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.7
FF:10153-102I9 76 years, female 35.5
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 25.1
Min nTPM: 7.5
Sample A Male 25.1
Sample B Male 18.9
Sample C Female 17.2
Sample D Female 7.5
Hippocampal formation
nTPM: 33.8
Samples: 4

Max nTPM: 45.2
Min nTPM: 26.4
Sample A Male 26.4
Sample B Male 30.9
Sample C Female 45.2
Sample D Female 32.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69447782 Antisense, RP_050419_02_A12, Mouse strain C57BL/6J (56 days, male) 1.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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